Clostridioides difficile MT4854 |
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Putative Clostridioides difficile MT4854 RM systems
Ref: Gonzales-Luna,A.J. et al. Anaerobe (2021) In press
REBASE ref # 32666
Complete sequence: 3,998,618 bp
GenBank #: CP075684
REBASE acronym: CdiMT4854
Org_num: 50464
All begin KK111_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2280 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 2285 | C | C.Pdi120IIP (89% identity) | C.CdiMT4854ORF2290P | |
| 2290 | M | M1.Pdi120II (100% identity) | ACGGC | M1.CdiMT4854ORF2290P |
| 2295 | M | M2.Pdi120II (100% identity) | ACGGC | M2.CdiMT4854ORF2290P |
| 2300 | 257 aa hypothetical protein | |||
| 2305 | R | R1.Pdi120IIP (100% identity) | ACGGC | R1.CdiMT4854ORF2290P |
| 2310 | R | R2.Pdi120IIP (100% identity) | R2.CdiMT4854ORF2290P | |
| 2315 | CGNR zinc finger domain-containing protein | |||
| 2390 | methionine adenosyltransferase | |||
| 2395 | M | M.Pdi120ORFBP (100% identity) | M.CdiMT4854ORF2395P | |
| 2400 | virulence protein | |||
| 14020 | patatin-like phospholipase family protein | |||
| 14025 | M | M.Pdi120I (100% identity) | CAAAAA | M.CdiMT4854ORF14025P |
| 14030 | Rrf2 family transcriptional regulator | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10550 | sigma 54-interacting transcriptional regulator | |||
| 10555 | R | Pdi120McrCP (100% identity) | CdiMT4854McrCP | |
| 10560 | R | Pdi120McrBP (100% identity) | CdiMT4854McrBP | |
| 10565 | cell division protein | |||