Ralstonia solanacearum SY1 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Ralstonia solanacearum SY1 RM systems
Ref: Sun,Y. unpublished
REBASE ref # 32922
| Sequence length: | GenBank #: | |
| Chromosome: | 3,702,477 bp | CP071914 |
| plasmid unnamed: | 2,177,065 bp | CP071915 |
REBASE acronym: RsosSY1
Org_num: 51400
All begin J4H89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 7475 | sensor histidine kinase N-terminal | |||
| 7480 | R | RsoHA41ORFJP (88% identity) | RsosSY1ORF7490P | |
| 7485 | 284 aa hypothetical protein | |||
| 7490 | M | M.RsoHA41ORFJP (100% identity) | M.RsosSY1ORF7490P | |
| 7495 | Rrf2 family transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 250 | tryptophan synthase subunit alpha | |||
| 255 | M | M.Rsp650ORF7450P (100% identity) | GTWWAC | M.RsosSY1ORF255P |
| 260 | tryptophan synthase subunit beta | |||
| 5635 | helix-turn-helix transcriptional regulator | |||
| 5645 | M | M.Rso3F1ORF1820P (100% identity) | M.RsosSY1ORF5645P | |
| 5650 | Com family DNA-binding transcriptional | |||
| 6490 | phage tail tape measure protein | |||
| 6495 | M | M.Rsp650ORF25870P (100% identity) | M.RsosSY1ORF6495P | |
| 6500 | IS5-like element IS1405 family transposase | |||
| 6605 | 121 aa hypothetical protein | |||
| 6610 | M | M2.RsoYC40ORF234P (99% identity) | M1.RsosSY1ORF6610P | |
| 6615 | M | M1.RsoRSNORF1245P (99% identity) | M2.RsosSY1ORF6610P | |
| 6620 | 71 aa hypothetical protein | |||
| 11960 | 135 aa hypothetical protein | |||
| 11965 | M | M2.RsoRS10ORF13005P (100% identity) | M1.RsosSY1ORF11965P | |
| 11970 | M | M1.RpsRSORF12165P (100% identity) | M2.RsosSY1ORF11965P | |
| 11975 | type III secretion system effector protein | |||
| plasmid unnamed | ||||
| 25020 | mannose-binding lectin protein | |||
| 25025 | M | M.RpsFJ1ORF24260P (100% identity) | M.RsosSY1ORF25025P | |
| 25030 | type III secretion system effector protein | |||