Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4681 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4681 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 32950
| Sequence length: | GenBank #: | |
| Chromosome: | 4,979,828 bp | AP023317 |
| plasmid pSAL4681-1: | 151,734 bp | AP023318 |
REBASE acronym: Sen4681
Org_num: 51574
All begin SEL4681_, SEL4681_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39440 | restriction endonuclease | |||
| 39450 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4681ORF39460P |
| 39460 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4681ORF39460P |
| 39470 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4681ORF39460P |
| 39480 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3550 | cell division protein DamX | |||
| 3560 | M | M.StyTDamP (100% identity) | GATC | M.Sen4681DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4480 | 54 aa hypothetical protein | |||
| 4490 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4681ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 6340 | 77 aa hypothetical protein | |||
| 6350 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen4681ORF6350P | |
| 6360 | replication protein A | |||
| 11000 | IS6 family transposase | |||
| 11010 | M | M.Ssp17155ORFGP (100% identity) | M.Sen4681ORF11010P | |
| 11020 | nuclease | |||
| 12130 | 174 aa hypothetical protein | |||
| 12140 | M | M.StyTORF1914P (100% identity) | M.Sen4681ORF12140P | |
| 12150 | 70 aa hypothetical protein | |||
| 18490 | 157 aa hypothetical protein | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen4681ORF18500P | |
| 18510 | crossover junction endodeoxyribonuclease rusA | |||
| 18950 | phosphohydrolase | |||
| 18960 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4681DcmP |
| 18970 | V | V.StyUK1DcmP (100% identity) | V.Sen4681DcmP | |
| 18980 | drug/metabolite exporter YedA | |||
| 39770 | 1213 aa hypothetical protein | |||
| 39780 | RM | StyUK1IV (100% identity) | GATCAG | Sen4681ORF39780P |
| 39790 | 363 aa hypothetical protein | |||
| plasmid pSAL4681-1 | ||||
| 1030 | 55 aa hypothetical protein | |||
| 1040 | M | M.YpsF1ORFCP (100% identity) | M.Sen4681ORF1040P | |
| 1050 | nuclease | |||
| 1540 | DNA-binding protein | |||
| 1550 | M | M.YpsF1ORFDP (95% identity) | M.Sen4681ORF1550P | |
| 1560 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 34560 | 33 aa hypothetical protein | |||
| 34570 | R | StyUK1IP (99% identity) | CAGAG | Sen4681ORF34580P |
| 34580 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4681ORF34580P |
| 34590 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 39430 | membrane protein | |||
| 39440 | R | StyUK1MrrP (100% identity) | Sen4681MrrP | |
| 39450 | type I restriction-modification system | |||