Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4578 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4578 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 32950
| Sequence length: | GenBank #: | |
| Chromosome: | 4,889,480 bp | AP023309 |
| plasmid pSAL4578-1: | 229,829 bp | AP023310 |
REBASE acronym: Sen4578
Org_num: 51570
All begin SEL4578_, SEL4578_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38260 | restriction endonuclease | |||
| 38270 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4578ORF38280P |
| 38280 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4578ORF38280P |
| 38290 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4578ORF38280P |
| 38300 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3550 | cell division protein DamX | |||
| 3560 | M | M.StyTDamP (100% identity) | GATC | M.Sen4578DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4480 | 54 aa hypothetical protein | |||
| 4490 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4578ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 11360 | 174 aa hypothetical protein | |||
| 11370 | M | M.StyTORF1914P (100% identity) | M.Sen4578ORF11370P | |
| 11380 | 70 aa hypothetical protein | |||
| 17710 | 157 aa hypothetical protein | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen4578ORF17720P | |
| 17730 | crossover junction endodeoxyribonuclease rusA | |||
| 18170 | phosphohydrolase | |||
| 18180 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4578DcmP |
| 18190 | V | V.StyUK1DcmP (100% identity) | V.Sen4578DcmP | |
| 18200 | drug/metabolite exporter YedA | |||
| 38590 | 1213 aa hypothetical protein | |||
| 38600 | RM | StyUK1IV (100% identity) | GATCAG | Sen4578ORF38600P |
| 38610 | 363 aa hypothetical protein | |||
| plasmid pSAL4578-1 | ||||
| 1470 | nuclease | |||
| 1480 | M | M.Sen4614ORF1490P (100% identity) | M.Sen4578ORF1480P | |
| 1490 | 55 aa hypothetical protein | |||
| 2260 | 48 aa hypothetical protein | |||
| 2270 | M | M.YpsF1ORFBP (100% identity) | M.Sen4578ORF2270P | |
| 2280 | 202 aa hypothetical protein | |||
| 2510 | DNA-binding protein | |||
| 2520 | M | M.YpsF1ORFDP (95% identity) | M.Sen4578ORF2520P | |
| 2530 | 284 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 33810 | 33 aa hypothetical protein | |||
| 33820 | R | StyUK1IP (99% identity) | CAGAG | Sen4578ORF33830P |
| 33830 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4578ORF33830P |
| 33840 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38250 | membrane protein | |||
| 38260 | R | StyUK1MrrP (100% identity) | Sen4578MrrP | |
| 38270 | type I restriction-modification system | |||