Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4334 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4334 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 32950
Complete sequence: 4,916,924 bp
GenBank #: AP023299
REBASE acronym: Sen4334
Org_num: 51565
All begin SEL4334_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 38550 | restriction endonuclease | |||
| 38560 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4334ORF38570P |
| 38570 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4334ORF38570P |
| 38580 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4334ORF38570P |
| 38590 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | cell division protein DamX | |||
| 3560 | M | M.StyTDamP (100% identity) | GATC | M.Sen4334DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4480 | 54 aa hypothetical protein | |||
| 4490 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4334ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 10570 | IS6 family transposase | |||
| 10580 | M | M.Ssp17155ORFGP (100% identity) | M.Sen4334ORF10580P | |
| 10590 | nuclease | |||
| 11700 | 174 aa hypothetical protein | |||
| 11710 | M | M.StyTORF1914P (100% identity) | M.Sen4334ORF11710P | |
| 11720 | 70 aa hypothetical protein | |||
| 18050 | 157 aa hypothetical protein | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen4334ORF18060P | |
| 18070 | crossover junction endodeoxyribonuclease rusA | |||
| 18510 | phosphohydrolase | |||
| 18520 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4334DcmP |
| 18530 | V | V.StyUK1DcmP (100% identity) | V.Sen4334DcmP | |
| 18540 | drug/metabolite exporter YedA | |||
| 38880 | 1213 aa hypothetical protein | |||
| 38890 | RM | StyUK1IV (100% identity) | GATCAG | Sen4334ORF38890P |
| 38900 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 34110 | 33 aa hypothetical protein | |||
| 34120 | R | StyUK1IP (99% identity) | CAGAG | Sen4334ORF34130P |
| 34130 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4334ORF34130P |
| 34140 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 38540 | membrane protein | |||
| 38550 | R | StyUK1MrrP (100% identity) | Sen4334MrrP | |
| 38560 | type I restriction-modification system | |||