Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4261 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-4261 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 32950
| Sequence length: | GenBank #: | |
| Chromosome: | 4,915,346 bp | AP023294 |
| plasmid pSAL4261-1: | 60,222 bp | AP023295 |
| plasmid pSAL4261-2: | 6,835 bp | AP023296 |
REBASE acronym: Sen4261
Org_num: 51564
All begin SEL4261_, SEL4261_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38610 | restriction endonuclease | |||
| 38620 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen4261ORF38630P |
| 38630 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen4261ORF38630P |
| 38640 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen4261ORF38630P |
| 38650 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3550 | cell division protein DamX | |||
| 3560 | M | M.StyTDamP (100% identity) | GATC | M.Sen4261DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4480 | 54 aa hypothetical protein | |||
| 4490 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen4261ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 10590 | IS6 family transposase | |||
| 10600 | M | M.Ssp17155ORFGP (100% identity) | M.Sen4261ORF10600P | |
| 10610 | nuclease | |||
| 11730 | 174 aa hypothetical protein | |||
| 11740 | M | M.StyTORF1914P (100% identity) | M.Sen4261ORF11740P | |
| 11750 | 70 aa hypothetical protein | |||
| 18090 | 157 aa hypothetical protein | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen4261ORF18100P | |
| 18110 | crossover junction endodeoxyribonuclease rusA | |||
| 18550 | phosphohydrolase | |||
| 18560 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen4261DcmP |
| 18570 | V | V.StyUK1DcmP (100% identity) | V.Sen4261DcmP | |
| 18580 | drug/metabolite exporter YedA | |||
| 38940 | 1213 aa hypothetical protein | |||
| 38950 | RM | StyUK1IV (100% identity) | GATCAG | Sen4261ORF38950P |
| 38960 | 363 aa hypothetical protein | |||
| plasmid pSAL4261-1 | ||||
| 1080 | 308 aa hypothetical protein | |||
| 1090 | M | M.Eco23C10ORF22940P (100% identity) | M.Sen4261ORF1090P | |
| 1100 | 73 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 34170 | 33 aa hypothetical protein | |||
| 34180 | R | StyUK1IP (99% identity) | CAGAG | Sen4261ORF34190P |
| 34190 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen4261ORF34190P |
| 34200 | MFS transporter | |||
| plasmid pSAL4261-2 | ||||
| 2010 | M | M.SenS089ORF25085P (100% identity) | M.Sen4261ORF2010P | |
| 2020 | R | SenSO21ORF25170P (100% identity) | Sen4261ORF2010P | |
| 2030 | rop protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 38600 | membrane protein | |||
| 38610 | R | StyUK1MrrP (100% identity) | Sen4261MrrP | |
| 38620 | type I restriction-modification system | |||