Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-3844 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-3844 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 32950
Complete sequence: 4,957,303 bp
GenBank #: AP023290
REBASE acronym: Sen3844
Org_num: 51562
All begin SEL3844_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39170 | restriction endonuclease | |||
| 39180 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen3844ORF39190P |
| 39190 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen3844ORF39190P |
| 39200 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen3844ORF39190P |
| 39210 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | cell division protein DamX | |||
| 3560 | M | M.StyTDamP (100% identity) | GATC | M.Sen3844DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4480 | 54 aa hypothetical protein | |||
| 4490 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3844ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 6310 | 77 aa hypothetical protein | |||
| 6320 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen3844ORF6320P | |
| 6330 | replication protein A | |||
| 11860 | 174 aa hypothetical protein | |||
| 11870 | M | M.StyTORF1914P (100% identity) | M.Sen3844ORF11870P | |
| 11880 | 70 aa hypothetical protein | |||
| 18220 | 157 aa hypothetical protein | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen3844ORF18230P | |
| 18240 | crossover junction endodeoxyribonuclease rusA | |||
| 18680 | phosphohydrolase | |||
| 18690 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen3844DcmP |
| 18700 | V | V.StyUK1DcmP (100% identity) | V.Sen3844DcmP | |
| 18710 | drug/metabolite exporter YedA | |||
| 39500 | 1213 aa hypothetical protein | |||
| 39510 | RM | StyUK1IV (100% identity) | GATCAG | Sen3844ORF39510P |
| 39520 | 363 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 34310 | 33 aa hypothetical protein | |||
| 34320 | R | StyUK1IP (99% identity) | CAGAG | Sen3844ORF34330P |
| 34330 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen3844ORF34330P |
| 34340 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 39160 | membrane protein | |||
| 39170 | R | StyUK1MrrP (100% identity) | Sen3844MrrP | |
| 39180 | type I restriction-modification system | |||