Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-3837 |
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Putative Salmonella enterica subsp. enterica serovar 4,[5],12:i:- L-3837 RM systems
Ref: Sekizuka,T. et al. unpublished
REBASE ref # 32950
Complete sequence: 4,998,784 bp
GenBank #: AP023289
REBASE acronym: Sen3837
Org_num: 51561
All begin SEL3837_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 39890 | restriction endonuclease | |||
| 39900 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen3837ORF39910P |
| 39910 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen3837ORF39910P |
| 39920 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen3837ORF39910P |
| 39930 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3550 | cell division protein DamX | |||
| 3560 | M | M.StyTDamP (100% identity) | GATC | M.Sen3837DamP |
| 3570 | ribulose-phosphate 3-epimerase | |||
| 4480 | 54 aa hypothetical protein | |||
| 4490 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3837ORF4490P |
| 4500 | DNA-binding protein Fis | |||
| 6310 | 77 aa hypothetical protein | |||
| 6320 | M | M.SensSZL38ORF19965P (100% identity) | M.Sen3837ORF6320P | |
| 6330 | replication protein A | |||
| 11830 | IS6 family transposase | |||
| 11840 | M | M.Ssp17155ORFGP (100% identity) | M.Sen3837ORF11840P | |
| 11850 | nuclease | |||
| 13040 | 174 aa hypothetical protein | |||
| 13050 | M | M.StyTORF1914P (100% identity) | M.Sen3837ORF13050P | |
| 13060 | 70 aa hypothetical protein | |||
| 19390 | 157 aa hypothetical protein | |||
| ??? | M | M.SenceORFKP (100% identity) | M.Sen3837ORF19400P | |
| 19410 | crossover junction endodeoxyribonuclease rusA | |||
| 19850 | phosphohydrolase | |||
| 19860 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen3837DcmP |
| 19870 | V | V.StyUK1DcmP (100% identity) | V.Sen3837DcmP | |
| 19880 | drug/metabolite exporter YedA | |||
| 40220 | 1213 aa hypothetical protein | |||
| 40230 | RM | StyUK1IV (100% identity) | GATCAG | Sen3837ORF40230P |
| 40240 | 363 aa hypothetical protein | |||
| 43060 | LexA family transcriptional regulator | |||
| 43070 | M | M.SflLIN17ORF20615P (100% identity) | GATC | M.Sen3837ORF43070P |
| 43080 | 162 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 35440 | 33 aa hypothetical protein | |||
| 35450 | R | StyUK1IP (99% identity) | CAGAG | Sen3837ORF35460P |
| 35460 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen3837ORF35460P |
| 35470 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 39880 | membrane protein | |||
| 39890 | R | StyUK1MrrP (100% identity) | Sen3837MrrP | |
| 39900 | type I restriction-modification system | |||