Salmonella enterica subsp. enterica serovar Anatum CFSAN003985 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Anatum CFSAN003985 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,673,018 bp
GenBank #: CP074670
REBASE acronym: Sen3985
Org_num: 51577
All begin AWA92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19050 | restriction endonuclease | |||
| 19055 | R | SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | Sen3985ORF19060P |
| 19060 | M | M.SenNCTR462ORF2380P (99% identity) | CCANNNNNNNNTGAG | M.Sen3985ORF19060P |
| 19065 | S | S.SenNCTR462ORF2380P (100% identity) | CCANNNNNNNNTGAG | S.Sen3985ORF19060P |
| 19070 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1770 | cell division protein DamX | |||
| 1775 | M | M.StyTDamP (100% identity) | GATC | M.Sen3985DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2260 | DUF2556 family protein | |||
| 2265 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen3985ORF2265P |
| 2270 | DNA-binding transcriptional regulator Fis | |||
| 8680 | phosphohydrolase | |||
| 8685 | M | M.SenNCTR462DcmP (100% identity) | CCWGG | M.Sen3985DcmP |
| 8690 | V | V.StyUK1DcmP (100% identity) | V.Sen3985DcmP | |
| 8695 | drug/metabolite exporter YedA | |||
| 13570 | 85 aa hypothetical protein | |||
| 13575 | M | M.Sen29ORF1351P (98% identity) | M.Sen3985ORF13575P | |
| 13580 | 142 aa hypothetical protein | |||
| 19190 | YebC/PmpR family DNA-binding transcriptional | |||
| 19195 | R | Sens24219ORF19960P (100% identity) | Sen3985ORF19195P | |
| 19200 | RES domain-containing protein | |||
| 19215 | 121 aa hypothetical protein | |||
| 19220 | M | M.SenAnaIV (100% identity) | CCWWGG | M.Sen3985ORF19220P |
| 19225 | R | SenAnaIVP (91% identity) | CCWWGG | Sen3985ORF19220P |
| 19230 | 146 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16850 | 33 aa hypothetical protein | |||
| 16855 | R | SenNCTR462ORF9180P (99% identity) | CAGAG | Sen3985ORF16860P |
| 16860 | M | M.SenST224ORF2660P (100% identity) | CAGAG | M.Sen3985ORF16860P |
| 16865 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19045 | BrnT family toxin | |||
| 19050 | R | SenNCTR462MrrP (100% identity) | Sen3985MrrP | |
| 19055 | type I restriction-modification system | |||