Haemophilus influenzae CHBN-V-1 |
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Putative Haemophilus influenzae CHBN-V-1 RM systems
Ref: Takemura,R. et al. unpublished
REBASE ref # 32757
Complete sequence: 1,953,394 bp
GenBank #: AP018781
REBASE acronym: HinV1
Org_num: 50837
All begin CHBNV1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 8810 | 209 aa hypothetical protein | |||
| 8820 | R | HinV3ORF8550P (99% identity) | HinV1ORF8850P | |
| 8830 | 313 aa hypothetical protein | |||
| 8840 | S | S.HinV3ORF8550P (100% identity) | S.HinV1ORF8850P | |
| 8850 | M | M.HinV3ORF8550P (100% identity) | M.HinV1ORF8850P | |
| 8860 | oligopeptidase A | |||
| 9910 | signal recognition particle protein | |||
| 9920 | R | HinV3ORF10730P (100% identity) | ATTYNNNNNCGT | HinV1ORF9950P |
| 9930 | S | S.HinV3ORF10730P (100% identity) | ATTYNNNNNCGT | S.HinV1ORF9950P |
| 9940 | transcriptional regulator | |||
| 9950 | M | M.HinV3ORF10730P (100% identity) | ATTYNNNNNCGT | M.HinV1ORF9950P |
| 9960 | GTP cyclohydrolase 1 type 2 | |||
| 13430 | translation initiation factor IF-2 | |||
| 13440 | R | HinV3ORF13350P (100% identity) | TTACNNNNNTTA | HinV1ORF13470P |
| 13450 | 212 aa hypothetical protein | |||
| 13460 | S | S.HinV3ORF13350P (100% identity) | TTACNNNNNTTA | S.HinV1ORF13470P |
| ??? | M | M.Hin2866IV (100% identity) | TTACNNNNNTTA | M.HinV1ORF13470P |
| 13480 | ribosome-binding factor A | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4240 | 111 aa hypothetical protein | |||
| 4250 | M | M.HinII2ORF15630P (100% identity) | M.HinV1ORF4250P | |
| 4260 | 166 aa hypothetical protein | |||
| 7420 | 205 aa hypothetical protein | |||
| 7430 | R | HinR535ORF8620P (100% identity) | HinV1ORF7430P | |
| 7440 | DNA methyltransferase | |||
| 7430 | 761 aa hypothetical protein | |||
| 7440 | M | M.HinIII5ORF6600P (100% identity) | M.HinV1ORF7440P | |
| 7450 | 23S rRNA (uracil(1939)-C(5))-methyltransferase | |||
| 10250 | 179 aa hypothetical protein | |||
| 10260 | M | M.Hin8455ORF1770P (88% identity) | M.HinV1ORF10260P | |
| 10270 | 63 aa hypothetical protein | |||
| 12800 | 111 aa hypothetical protein | |||
| 12810 | M | M.Hin6977ORF250P (98% identity) | M.HinV1ORF12810P | |
| 12820 | 162 aa hypothetical protein | |||
| 15040 | chromosome partition protein MukE | |||
| 15050 | R | HinGG2ORF7515P (100% identity) | RGCGCY | HinV1ORF15060P |
| 15060 | M | M.Hin3052ORF820P (100% identity) | RGCGCY | M.HinV1ORF15060P |
| 15070 | chromosome partition protein MukF | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3290 | regulator of ribonuclease activity B | |||
| 3300 | R | HinV2ORF3260P (100% identity) | HinV1ORF3310P | |
| 3310 | M | M.HinV3ORF3780P (99% identity) | M.HinV1ORF3310P | |
| 3320 | 47 aa hypothetical protein | |||
| 18210 | ribonuclease HII | |||
| ??? | M | M.Hin2866I (99% identity) | M.HinV1ORF18220P | |
| 18240 | R | HinV3ORF18120P (96% identity) | HinV1ORF18220P | |
| 18250 | 113 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8900 | phosphatidylglycerophosphatase B | |||
| 8910 | M | M.Hin11873ORF868P (100% identity) | GATC | M.HinV1ORF8910P |
| 8920 | 3-dehydroquinate synthase | |||