Dickeya dianthicola 16JP03 |
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Putative Dickeya dianthicola 16JP03 RM systems
Ref: Ge,T. unpublished
REBASE ref # 32309
Complete sequence: 4,909,059 bp
GenBank #: CP069605
REBASE acronym: DdiJP03
Org_num: 48851
All begin JRZ92_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3285 | 124 aa hypothetical protein | |||
| 3290 | S | S2.DdiPA24ORF3290P (100% identity) | S2.DdiJP03ORF3300P | |
| 3295 | S | S1.DdiPA24ORF3290P (100% identity) | S1.DdiJP03ORF3300P | |
| 3300 | M | M.DdiPA24ORF3290P (100% identity) | M.DdiJP03ORF3300P | |
| 3305 | R | DdiPA24ORF3290P (100% identity) | DdiJP03ORF3300P | |
| 3310 | ribosomal protein S18-alanine | |||
| 4600 | M48 family metallopeptidase | |||
| 4605 | R | DdiPA24ORF4615P (100% identity) | DdiJP03ORF4630P | |
| 4610 | macro domain-containing protein | |||
| 4615 | DUF4433 domain-containing protein | |||
| 4620 | DUF4433 domain-containing protein | |||
| 4625 | S | S.DdiPA24ORF4615P (100% identity) | S.DdiJP03ORF4630P | |
| 4630 | M | M.DdiPA24ORF4615P (100% identity) | M.DdiJP03ORF4630P | |
| 4635 | transcription factor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2185 | amino acid transporter | |||
| 2190 | V | V.DdiPA24ORF2190P (100% identity) | V.DdiJP03ORF2195P | |
| ??? | M | M.DdiPA24ORF2190P (100% identity) | M.DdiJP03ORF2195P | |
| 2200 | R | DdiPA24ORF2190P (100% identity) | DdiJP03ORF2195P | |
| 2205 | MFS transporter | |||
| 3945 | 76 aa hypothetical protein | |||
| 3950 | M | M.DdiPA24ORF3940P (100% identity) | M.DdiJP03ORF3950P | |
| 3955 | DNA cytosine methyltransferase | |||
| 3950 | Dam family site-specific | |||
| 3955 | M | M.DdiPA24ORF3945P (100% identity) | M.DdiJP03ORF3955P | |
| 3960 | replication endonuclease | |||
| 3960 | replication endonuclease | |||
| 3965 | R | DdiPA24ORF3960P (100% identity) | DdiJP03ORF3970P | |
| 3970 | M | M.DdiPA24ORF3960P (100% identity) | TGGCCA | M.DdiJP03ORF3970P |
| 3975 | 51 aa hypothetical protein | |||
| 7350 | 857 aa hypothetical protein | |||
| 7355 | M | M.DdiPA24ORF7340P (100% identity) | M.DdiJP03ORF7355P | |
| 7360 | DUF1738 domain-containing protein | |||
| 7790 | phosphonate metabolism protein PhnP | |||
| 7795 | R | DdiPA24ORF7785P (100% identity) | DdiJP03ORF7800P | |
| 7800 | M | M.DdiPA24ORF7785P (100% identity) | M.DdiJP03ORF7800P | |
| 7805 | phosphonate ABC transporter ATP-binding protein | |||
| 15950 | type II secretion system pilot lipoprotein GspS | |||
| 15955 | R | DdiPA24ORF15945P (100% identity) | DdiJP03ORF15960P | |
| 15960 | M | M.DdiPA24ORF15945P (100% identity) | M.DdiJP03ORF15960P | |
| 15965 | recombinase family protein | |||
| 16215 | 222 aa hypothetical protein | |||
| 16220 | M | M.DdiPA24ORF16205P (100% identity) | M.DdiJP03ORF16220P | |
| 16225 | 67 aa hypothetical protein | |||
| 20300 | ribulose-phosphate 3-epimerase | |||
| 20305 | M | M.Dsp2401ORFJP (100% identity) | GATC | M.DdiJP03DamP |
| 20310 | SPOR domain-containing protein | |||