Salmonella enterica subsp. enterica serovar Johannesburg CFSAN024562 |
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Putative Salmonella enterica subsp. enterica serovar Johannesburg CFSAN024562 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,711,230 bp
GenBank #: CP074325
REBASE acronym: Sen24562
Org_num: 49023
All begin JYM89_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19440 | type IV toxin-antitoxin system YeeU family | |||
| 19445 | M | M1.SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | M.Sen24562ORF19445P |
| 19450 | S | S1.SenSmo02ORF2465P (98% identity) | GNNTAYNNNNNRTGG | S.Sen24562ORF19445P |
| 19455 | DUF262 domain-containing protein | |||
| 19460 | DUF262 domain-containing protein | |||
| 19465 | R | SenSmo02ORF2465P (100% identity) | GNNTAYNNNNNRTGG | Sen24562ORF19445P |
| 19470 | M48 family metallopeptidase | |||
| 19470 | M48 family metallopeptidase | |||
| 19475 | M | M.SenSmo02ORF2495P (100% identity) | M.Sen24562ORF19475P | |
| 19480 | S | S.SenSmo02ORF2495P (100% identity) | S.Sen24562ORF19475P | |
| 19485 | 62 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1690 | cell division protein DamX | |||
| 1695 | M | M.StyTDamP (100% identity) | GATC | M.Sen24562DamP |
| 1700 | ribulose-phosphate 3-epimerase | |||
| 2180 | DUF2556 family protein | |||
| 2185 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24562ORF2185P |
| 2190 | DNA-binding transcriptional regulator Fis | |||
| 5280 | TraR/DksA family transcriptional regulator | |||
| 5285 | M | M.Sens23357ORF5340P (100% identity) | M.Sen24562ORF5285P | |
| 5290 | replication endonuclease | |||
| 6935 | DUF550 domain-containing protein | |||
| 6940 | M | M.Sen9981ORF7135P (100% identity) | M.Sen24562ORF6940P | |
| 6945 | ead/Ea22-like family protein | |||
| 9080 | phosphohydrolase | |||
| 9085 | M | M.SenST203DcmP (100% identity) | CCWGG | M.Sen24562DcmP |
| 9090 | V | V.StyUK1DcmP (100% identity) | V.Sen24562DcmP | |
| 9095 | drug/metabolite exporter YedA | |||
| 17185 | 173 aa hypothetical protein | |||
| 17190 | R | Sen9872IVP (100% identity) | CTTAAG | Sen24562ORF17195P |
| 17195 | M | M.Sen9872IV (100% identity) | CTTAAG | M.Sen24562ORF17195P |
| 17200 | 66 aa hypothetical protein | |||
| 19420 | YebC/PmpR family DNA-binding transcriptional | |||
| 19425 | R | Ssp8103ORF19015P (100% identity) | Sen24562ORF19425P | |
| 19430 | restriction endonuclease | |||
| 20860 | LexA family transcriptional regulator | |||
| 20865 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Sen24562ORF20865P |
| 20870 | 330 aa hypothetical protein | |||
| 21795 | replication endonuclease | |||
| 21800 | M | M.Sens24230ORF22495P (100% identity) | M.Sen24562ORF21800P | |
| 21805 | 127 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17055 | 33 aa hypothetical protein | |||
| 17060 | R | Sens30601ORF17060P (100% identity) | CAGAG | Sen24562ORF17065P |
| 17065 | M | M.Sens679ORF16435P (100% identity) | CAGAG | M.Sen24562ORF17065P |
| 17070 | MFS transporter | |||