Salmonella enterica subsp. enterica serovar Newport CFSAN024414 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN024414 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,682,982 bp
GenBank #: CP074337
REBASE acronym: Sen24414
Org_num: 49038
All begin JYM81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19095 | 322 aa hypothetical protein | |||
| 19100 | R | Spy5740IP (99% identity) | GACNNNNNNNRTCC | Sen24414ORF19105P |
| 19105 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen24414ORF19105P |
| 19110 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen24414ORF19105P |
| 19115 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.Sen24414DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24414ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 5440 | TraR/DksA family transcriptional regulator | |||
| 5445 | M | M.SenSL491ORF2393P (100% identity) | M.Sen24414ORF5445P | |
| 5450 | replication endonuclease | |||
| 8125 | 127 aa hypothetical protein | |||
| 8130 | M | M.Eco9067ORF1166P (98% identity) | M.Sen24414ORF8130P | |
| 8135 | 73 aa hypothetical protein | |||
| 9070 | phosphohydrolase | |||
| 9075 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen24414DcmP |
| 9080 | V | V.StyTDcmP (100% identity) | V.Sen24414DcmP | |
| 9085 | drug/metabolite exporter YedA | |||
| 19235 | YebC/PmpR family DNA-binding transcriptional | |||
| 19240 | R | SenS224ORF20045P (100% identity) | Sen24414ORF19240P | |
| 19245 | retron St85 family RNA-directed DNA polymerase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16890 | 33 aa hypothetical protein | |||
| 16895 | R | Ssp6947IIP (100% identity) | CAGAG | Sen24414ORF16900P |
| 16900 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen24414ORF16900P |
| 16905 | MFS transporter | |||