Salmonella enterica subsp. enterica serovar Newport CFSAN024555 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Newport CFSAN024555 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,757,998 bp
GenBank #: CP074327
REBASE acronym: Sen24555
Org_num: 49043
All begin JYM64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19365 | 322 aa hypothetical protein | |||
| 19370 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen24555ORF19375P |
| 19375 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen24555ORF19375P |
| 19380 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen24555ORF19375P |
| 19385 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.Sen24555DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24555ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 5460 | DUF3850 domain-containing protein | |||
| 5465 | M | M.Sens8899ORF5350P (100% identity) | GATC | M.Sen24555ORF5465P |
| 5470 | replication endonuclease | |||
| 9165 | phosphohydrolase | |||
| 9170 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen24555DcmP |
| 9175 | V | V.StyTDcmP (100% identity) | V.Sen24555DcmP | |
| 9180 | drug/metabolite exporter YedA | |||
| 13145 | RusA family crossover junction | |||
| 13150 | M | M.Sen495ORF13185P (100% identity) | M.Sen24555ORF13150P | |
| 13155 | PerC family transcriptional regulator | |||
| 19505 | YebC/PmpR family DNA-binding transcriptional | |||
| 19510 | R | SenS224ORF20045P (100% identity) | Sen24555ORF19510P | |
| 19515 | toprim domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 17160 | 33 aa hypothetical protein | |||
| 17165 | R | Ssp6947IIP (100% identity) | CAGAG | Sen24555ORF17170P |
| 17170 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen24555ORF17170P |
| 17175 | MFS transporter | |||