Salmonella enterica subsp. enterica serovar Newport CFSAN024608 |
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Putative Salmonella enterica subsp. enterica serovar Newport CFSAN024608 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,694,492 bp
GenBank #: CP074263
REBASE acronym: Sen24608
Org_num: 49045
All begin JYM80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19180 | 322 aa hypothetical protein | |||
| 19185 | R | Spy5740IP (100% identity) | GACNNNNNNNRTCC | Sen24608ORF19190P |
| 19190 | M | M.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | M.Sen24608ORF19190P |
| 19195 | S | S.SenS3ORF11567P (100% identity) | GACNNNNNNNRTCC | S.Sen24608ORF19190P |
| 19200 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1755 | cell division protein DamX | |||
| 1760 | M | M.StyTDamP (100% identity) | GATC | M.Sen24608DamP |
| 1765 | ribulose-phosphate 3-epimerase | |||
| 2245 | DUF2556 family protein | |||
| 2250 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen24608ORF2250P |
| 2255 | DNA-binding transcriptional regulator Fis | |||
| 9160 | phosphohydrolase | |||
| 9165 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen24608DcmP |
| 9170 | V | V.StyTDcmP (100% identity) | V.Sen24608DcmP | |
| 9175 | drug/metabolite exporter YedA | |||
| 19320 | YebC/PmpR family DNA-binding transcriptional | |||
| 19325 | R | SenS224ORF20045P (100% identity) | Sen24608ORF19325P | |
| 19330 | toprim domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16975 | 33 aa hypothetical protein | |||
| 16980 | R | Ssp6947IIP (100% identity) | CAGAG | Sen24608ORF16985P |
| 16985 | M | M.SenZYXORFDP (100% identity) | CAGAG | M.Sen24608ORF16985P |
| 16990 | MFS transporter | |||