Salmonella enterica subsp. enterica serovar Potsdam CFSAN029622 |
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Putative Salmonella enterica subsp. enterica serovar Potsdam CFSAN029622 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,896,060 bp
GenBank #: CP074241
REBASE acronym: Sen29622
Org_num: 49050
All begin VM35_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20430 | restriction endonuclease | |||
| 20435 | R | SenZYXORFCP (99% identity) | AACNNNNNNGTRC | Sen29622ORF20440P |
| 20440 | M | M.StySPI (99% identity) | AACNNNNNNGTRC | M.Sen29622ORF20440P |
| 20445 | S | S.StySPI (100% identity) | AACNNNNNNGTRC | S.Sen29622ORF20440P |
| 20450 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.Sen29622DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.StyUK1III (100% identity) | ATGCAT | M.Sen29622ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 3220 | DUF3850 domain-containing protein | |||
| 3225 | M | M.SspZ54ORF6040P (100% identity) | M.Sen29622ORF3225P | |
| 3230 | replication endonuclease | |||
| 9250 | phosphohydrolase | |||
| 9255 | M | M.SenZYXDcmP (100% identity) | CCWGG | M.Sen29622DcmP |
| 9260 | V | V.StyTDcmP (100% identity) | V.Sen29622DcmP | |
| 9265 | drug/metabolite exporter YedA | |||
| 13370 | 177 aa hypothetical protein | |||
| 13375 | M | M.SglORF828P (100% identity) | M.Sen29622ORF13375P | |
| 13380 | holin | |||
| 14195 | DUF551 domain-containing protein | |||
| 14200 | M | M.StyTORF1914P (100% identity) | M.Sen29622ORF14200P | |
| 14205 | ead/Ea22-like family protein | |||
| 20570 | YebC/PmpR family DNA-binding transcriptional | |||
| 20575 | R | SenZYXORFBP (100% identity) | Sen29622ORF20575P | |
| 20580 | sce7725 family protein | |||
| 22910 | phage portal protein | |||
| 22915 | R | R1.SenXB08ORF22340P (100% identity) | R1.Sen29622ORF22925P | |
| 22920 | R | SspS13ORF1655P (100% identity) | R2.Sen29622ORF22925P | |
| 22925 | M | M.SspS13ORF1655P (100% identity) | M.Sen29622ORF22925P | |
| 22930 | replication endonuclease | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18165 | 33 aa hypothetical protein | |||
| 18170 | R | SenZYXORFDP (99% identity) | CAGAG | Sen29622ORF18175P |
| 18175 | M | M.SenZYXORFDP (99% identity) | CAGAG | M.Sen29622ORF18175P |
| 18180 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 20425 | BrnT family toxin | |||
| 20430 | R | StyTMrrP (100% identity) | Sen29622MrrP | |
| 20435 | type I restriction-modification system | |||