Salmonella enterica subsp. enterica serovar Heidelberg SARA37 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Salmonella enterica subsp. enterica serovar Heidelberg SARA37 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,969,969 bp
GenBank #: CP074234
REBASE acronym: SenC2217
Org_num: 49012
All begin CAI30_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 21030 | restriction endonuclease | |||
| 21035 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | SenC2217ORF21040P |
| 21040 | M | M.Sens12373ORF19415P (100% identity) | GAGNNNNNNRTAYG | M.SenC2217ORF21040P |
| 21045 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.SenC2217ORF21040P |
| 21050 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1270 | 103 aa hypothetical protein | |||
| 1275 | M | M.StyR64ORFAP (100% identity) | M.SenC2217ORF1275P | |
| 1280 | 73 aa hypothetical protein | |||
| 2525 | cell division protein DamX | |||
| 2530 | M | M.StyTDamP (100% identity) | GATC | M.SenC2217DamP |
| 2535 | ribulose-phosphate 3-epimerase | |||
| 3015 | DUF2556 family protein | |||
| 3020 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC2217ORF3020P |
| 3025 | DNA-binding transcriptional regulator Fis | |||
| 6390 | 3-5 exonuclease | |||
| 6395 | M | M.Sen315ORF6240P (100% identity) | M.SenC2217ORF6395P | |
| 6400 | replication endonuclease | |||
| 9930 | phosphohydrolase | |||
| 9935 | M | M.SenZ223DcmP (100% identity) | CCWGG | M.SenC2217DcmP |
| 9940 | V | V.StyTDcmP (100% identity) | V.SenC2217DcmP | |
| 9945 | drug/metabolite exporter YedA | |||
| 14040 | RusA family crossover junction | |||
| 14045 | M | M.SenS16ORF9325P (100% identity) | M.SenC2217ORF14045P | |
| 14050 | PerC family transcriptional regulator | |||
| 14105 | ead/Ea22-like family protein | |||
| 14110 | M | M.SenSH7ORF6615P (100% identity) | M.SenC2217ORF14110P | |
| 14115 | Eaa protein | |||
| 21170 | YebC/PmpR family DNA-binding transcriptional | |||
| 21175 | R | Sens12373ORF19550P (100% identity) | SenC2217ORF21175P | |
| 21180 | fosfomycin resistance glutathione transferase | |||
| 21200 | RM | Sens12373ORF19575P (100% identity) | GATCAG | SenC2217ORF21200P |
| 21205 | DEAD/DEAH box helicase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 18380 | 33 aa hypothetical protein | |||
| 18385 | R | Sens12373ORF17180P (100% identity) | CAGAG | SenC2217ORF18390P |
| 18390 | M | M.Sen59882ORF11390P (100% identity) | CAGAG | M.SenC2217ORF18390P |
| 18395 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 21025 | BrnT family toxin | |||
| 21030 | R | StyUK1MrrP (100% identity) | SenC2217MrrP | |
| 21035 | type I restriction-modification system | |||