Salmonella enterica subsp. enterica serovar Thompson ATCC 8391 |
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Putative Salmonella enterica subsp. enterica serovar Thompson ATCC 8391 RM systems
Ref: Hoffmann,M. et al. unpublished
REBASE ref # 32354
Complete sequence: 4,691,274 bp
GenBank #: CP074209
REBASE acronym: SenC8391
Org_num: 49066
All begin JYM79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 18850 | 322 aa hypothetical protein | |||
| 18855 | R | Spy5740IP (100% identity) | AGANNNNNNNNCTGG | SenC8391ORF18860P |
| 18860 | M | M.Spy5740I (100% identity) | AGANNNNNNNNCTGG | M.SenC8391ORF18860P |
| 18865 | S | S.Spy5740I (100% identity) | AGANNNNNNNNCTGG | S.SenC8391ORF18860P |
| 18870 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1810 | cell division protein DamX | |||
| 1815 | M | M.StyTDamP (100% identity) | GATC | M.SenC8391DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2300 | DUF2556 family protein | |||
| 2305 | M | M.StyUK1III (100% identity) | ATGCAT | M.SenC8391ORF2305P |
| 2310 | DNA-binding transcriptional regulator Fis | |||
| 8825 | phosphohydrolase | |||
| 8830 | M | M.SspZ54DcmP (100% identity) | CCWGG | M.SenC8391DcmP |
| 8835 | V | V.StyUK1DcmP (100% identity) | V.SenC8391DcmP | |
| 8840 | drug/metabolite exporter YedA | |||
| 18990 | YebC/PmpR family DNA-binding transcriptional | |||
| 18995 | R | SensS639ORF19755P (100% identity) | SenC8391ORF18995P | |
| 19000 | 239 aa hypothetical protein | |||
| 19000 | 239 aa hypothetical protein | |||
| 19005 | R | Spy5740IVP (100% identity) | GGTACC | SenC8391ORF19010P |
| 19010 | M | M.Spy5740IV (100% identity) | GGTACC | M.SenC8391ORF19010P |
| 19015 | 202 aa hypothetical protein | |||
| 21345 | replication endonuclease | |||
| 21350 | M | M.Sen8391ORF21360P (87% identity) | M.SenC8391ORF21350P | |
| 21355 | 127 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 16525 | 33 aa hypothetical protein | |||
| 16530 | R | Ssp15303ORFGP (99% identity) | CAGAG | SenC8391ORF16535P |
| 16535 | M | M.Spy5740II (100% identity) | CAGAG | M.SenC8391ORF16535P |
| 16540 | MFS transporter | |||