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Putative Atopobiaceae bacterium P1 RM systems
Ref: Watanabe,Y. et al. unpublished
REBASE ref # 31951
Complete sequence: 2,028,478 bp
GenBank #: AP024608
REBASE acronym: AbaP1
Org_num: 47239
All begin ATOBIA_N
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
3560 | 197 aa hypothetical protein | |||
3570 | M | M.AbaTOC12ORF3460P (100% identity) | M.AbaP1ORF1490P | |
3580 | S | S2.AbaTOC12ORF3460P (55% identity) | S1.AbaP1ORF1490P | |
3590 | phage integrase | |||
3600 | S | S1.AbaTOC12ORF3460P (56% identity) | S2.AbaP1ORF1490P | |
3610 | R | AbaTOC12ORF3460P (100% identity) | AbaP1ORF1490P | |
3620 | 47 aa hypothetical protein | |||
7600 | transcriptional regulator | |||
7610 | R | Msa17ORFS1P (99% identity) | AbaP1ORF5540P | |
7620 | M | M.Msa17ORFS1P (99% identity) | M.AbaP1ORF5540P | |
7630 | S | S4.Fpl32125ORF15195P (78% identity) | S1.AbaP1ORF5540P | |
7640 | S | S.Mdi47132ORF4265P (35% identity) | S2.AbaP1ORF5540P | |
7650 | S | S3.PmeBin526ORFAP (87% identity) | S3.AbaP1ORF5540P | |
7660 | S | S2.Msa17ORFS1P (96% identity) | S4.AbaP1ORF5540P | |
7670 | transposase | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
5710 | 199 aa hypothetical protein | |||
5720 | M | M1.Aco17241aORF12110P (44% identity) | M.AbaP1ORF3640P | |
5730 | 95 aa hypothetical protein | |||
7550 | resolvase | |||
??? | RM | AbaTOC12ORF6850P (57% identity) | AbaP1ORF5480P | |
7570 | 97 aa hypothetical protein | |||
12540 | 75 aa hypothetical protein | |||
??? | R | KspMUSA4ORF12690P (31% identity) | AbaP1ORFAP | |
12550 | 297 aa hypothetical protein | |||
12560 | 64 aa hypothetical protein | |||
12570 | RM | PmeBin377ORFAP (44% identity) | AbaP1ORF10490P | |
12580 | 589 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
10090 | 226 aa hypothetical protein | |||
10100 | R | AbaTOC12ORF9230P (99% identity) | AbaP1ORF8030P | |
10110 | M | M.AbaTOC12ORF9230P (100% identity) | M.AbaP1ORF8030P | |
10120 | 43 aa hypothetical protein | |||
14490 | TnpV protein | |||
14500 | R | Bbi310ORF1925P (92% identity) | AbaP1ORF12430P | |
14510 | M | M.GvaUGORFBP (49% identity) | M.AbaP1ORF12430P | |
14520 | 105 aa hypothetical protein |