Chloracidobacterium thermophilum B |
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Putative Chloracidobacterium thermophilum B RM systems
Ref: Saini,M.K. et al. unpublished
REBASE ref # 13557
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,704,697 bp | CP072632 |
| chromosome 2: | 1,051,657 bp | CP072633 |
REBASE acronym: CthsB
Org_num: 49934
All begin J8C08_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 14360 | DUF3387 domain-containing protein | |||
| 14365 | M | M.CthBORF487P (100% identity) | M.CthsBORF14365P | |
| 14370 | S | S.CthBORF487P (99% identity) | S1.CthsBORF14365P | |
| 14375 | R | R2.CthBORF487P (99% identity) | CthsBORF14365P | |
| 14380 | S | S1.CspsDORF12415P (99% identity) | S2.CthsBORF14365P | |
| 14385 | DUF86 domain-containing protein | |||
| 14400 | DNA binding domain-containing protein | |||
| 14405 | M | M.CthBORF498P (95% identity) | M.CthsBORF14405P | |
| 14410 | 110 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 190 | HEAT repeat domain-containing protein | |||
| 195 | M | M.CthBORF42P (100% identity) | M.CthsBORF195P | |
| 200 | R | CthBORF42P (100% identity) | CthsBORF195P | |
| 205 | (2Fe-2S)-binding protein | |||
| 985 | NgoFVII family restriction endonuclease | |||
| 990 | RM | CthBORF193P (100% identity) | CthsBORF990P | |
| 995 | 359 aa hypothetical protein | |||
| 1305 | 226 aa hypothetical protein | |||
| 1310 | R | CthBORF256P (100% identity) | CthsBORF1315P | |
| 1315 | M | M.CthBORF256P (94% identity) | M.CthsBORF1315P | |
| 1320 | DUF1015 domain-containing protein | |||
| 2115 | ABC transporter ATP-binding protein | |||
| 2120 | M | M.CthBORF415P (99% identity) | M.CthsBORF2120P | |
| 2125 | ABC transporter ATP-binding protein | |||
| 2435 | N-acetylmuramoyl-L-alanine amidase | |||
| 2440 | M | M1.CthBORF478P (100% identity) | M.CthsBORF2440P | |
| 2445 | R | RspRSORF742P (64% identity) | CthsBORF2440P | |
| 2450 | DNA mismatch repair endonuclease MutL | |||
| 3035 | 270 aa hypothetical protein | |||
| 3040 | M | M.CthBORF594P (100% identity) | M.CthsBORF3040P | |
| 3045 | DNA adenine methylase | |||
| 3040 | DNA adenine methylase | |||
| 3045 | M | M.CthBORF595P (100% identity) | M.CthsBORF3045P | |
| 3050 | CPBP family intramembrane metalloprotease | |||
| 3790 | sulfite exporter TauE/SafE family protein | |||
| 3795 | RM | CthBORF745P (99% identity) | CthsBORF3795P | |
| 3800 | 388 aa hypothetical protein | |||
| 3805 | ATP-binding protein | |||
| 3810 | M | M.CspsDORF3670P (99% identity) | M.CthsBORF3810P | |
| 3815 | 209 aa hypothetical protein | |||
| 4875 | 228 aa hypothetical protein | |||
| 4880 | M | M.CthBORF965P (100% identity) | M.CthsBORF4880P | |
| 4885 | 511 aa hypothetical protein | |||
| 5120 | LEA type 2 family protein | |||
| 5125 | R | CthBORF1013P (99% identity) | CthsBORF5130P | |
| 5130 | M | M.CspsBORF5990P (99% identity) | M.CthsBORF5130P | |
| 5135 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 6075 | sensor histidine kinase | |||
| 6080 | R | CspsDORF5845P (97% identity) | CthsBORF6085P | |
| 6085 | M | M.CthBORF1201P (100% identity) | M.CthsBORF6085P | |
| 6090 | DUF499 domain-containing protein | |||
| 9185 | 4Fe-4S dicluster domain-containing protein | |||
| 9190 | M | M.CthBORF1769P (100% identity) | M.CthsBORF9190P | |
| 9195 | R | CthBORF1770P (100% identity) | CthsBORF9190P | |
| 9200 | C | C.CthBORF1769P (100% identity) | C.CthsBORF9190P | |
| 9205 | LptF/LptG family permease | |||
| 9770 | ABC transporter permease | |||
| 9775 | M | M.CspsDORF9295P (95% identity) | M.CthsBORF9775P | |
| 9780 | R | CthBORF1885P (100% identity) | CthsBORF9775P | |
| 9785 | methylmalonyl-CoA epimerase | |||
| 10030 | nucleotidyltransferase domain-containing | |||
| 10035 | M | M.CthBORF1936P (94% identity) | M.CthsBORF10035P | |
| 10040 | nucleotidyltransferase domain-containing | |||
| 10045 | R | CspsDORF9545P (97% identity) | CthsBORF10035P | |
| 10050 | DUF86 domain-containing protein | |||
| 11480 | type II toxin-antitoxin system PemK/MazF family | |||
| 11485 | M | M.CthBORF2229P (100% identity) | M.CthsBORF11485P | |
| 11490 | pseudogene | |||
| chromosome 2 | ||||
| 11905 | 1565 aa hypothetical protein | |||
| 11910 | R | CthBORF38P (100% identity) | CthsBORF11915P | |
| 11915 | M | M.Csp4045ORF11920P (91% identity) | M.CthsBORF11915P | |
| 11920 | 538 aa hypothetical protein | |||
| 11945 | NAD+ synthase | |||
| 11950 | R | CthBORF49P (100% identity) | CthsBORF11955P | |
| 11955 | M | M.CthBORF49P (100% identity) | M.CthsBORF11955P | |
| 11960 | transposase | |||
| 11965 | Ig domain-containing protein | |||
| 11970 | M | M.CthBORF52P (98% identity) | M.CthsBORF11970P | |
| 11975 | 192 aa hypothetical protein | |||
| 11970 | site-specific DNA-methyltransferase | |||
| ??? | R | CthBORF54P (100% identity) | CthsBORF11985P | |
| 11985 | M | M.CspsDORF14570P (97% identity) | M.CthsBORF11985P | |
| 11990 | site-specific DNA-methyltransferase | |||
| 11985 | DNA adenine methylase | |||
| 11990 | M | M.CthBORF56P (100% identity) | M.CthsBORF11990P | |
| ??? | R | CthBORF56P (100% identity) | CthsBORF11990P | |
| 12000 | NAD-dependent DNA ligase LigA | |||
| 12920 | PIN domain-containing protein | |||
| 12925 | M | M.CthBORF205P (100% identity) | M.CthsBORF12925P | |
| 12930 | helicase | |||
| 13285 | 154 aa hypothetical protein | |||
| 13290 | M | M.CthBORF276P (100% identity) | M.CthsBORF13290P | |
| 13295 | transposase | |||
| 13530 | transposase | |||
| 13535 | M | M.CspsDORF13245P (98% identity) | M.CthsBORF13535P | |
| 13540 | ABC transporter permease subunit | |||
| 14145 | ABC transporter substrate-binding protein | |||
| 14150 | R | M.CthBORF449P (37% identity) | CthsBORF14155P | |
| 14155 | M | M.CthBORF449P (59% identity) | M.CthsBORF14155P | |
| 14165 | APC family permease | |||
| 14440 | 142 aa hypothetical protein | |||
| 14445 | R | CthBORF505P (99% identity) | CthsBORF14450P | |
| 14450 | M | M.CthBORF505P (100% identity) | M.CthsBORF14450P | |
| 14455 | DUF3387 domain-containing protein | |||
| 14500 | ABC transporter ATP-binding protein | |||
| 14505 | M | M.CthBORF515P (100% identity) | M.CthsBORF14505P | |
| 14510 | HEAT repeat domain-containing protein | |||
| 14565 | amidohydrolase family protein | |||
| 14570 | M | M.CthBORF530P (100% identity) | M.CthsBORF14570P | |
| 14575 | 129 aa hypothetical protein | |||
| 15660 | alpha-E domain-containing protein | |||
| 15665 | M | M.CthBORF731P (94% identity) | M.CthsBORF15665P | |
| 15670 | R | CthBORF731P (100% identity) | CthsBORF15665P | |
| 15675 | response regulator | |||
| 16095 | 109 aa hypothetical protein | |||
| 16100 | R | CthBORF826P (74% identity) | CthsBORF16105P | |
| 16105 | M | M.CthBORF826P (100% identity) | M.CthsBORF16105P | |
| 16110 | tetratricopeptide repeat protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 11010 | 87 aa hypothetical protein | |||
| 11015 | R | CthBMrrP (100% identity) | CthsBMrrP | |
| 11020 | DNA polymerase I | |||