Bacteroides caccae CL03T12C61 |
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Putative Bacteroides caccae CL03T12C61 RM systems
Ref: Garcia-Bayona,L. et al. PLoS Genet 17 (4), e1009541 (2021)
REBASE ref # 31897
Complete sequence: 5,485,670 bp
GenBank #: CP072258
REBASE acronym: BcaC61
Org_num: 46991
All begin INE72_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 800 | 372 aa hypothetical protein | |||
| 802 | S | S3.Bca12C61ORF3335P (100% identity) | S.BcaC61ORF802P | |
| 803 | Tyrosine recombinase XerC | |||
| 803 | Tyrosine recombinase XerC | |||
| 804 | S | S2.Bca12C61ORF3335P (100% identity) | S2.BcaC61ORF808P | |
| 805 | S | S1.Bca12C61ORF3335P (100% identity) | S1.BcaC61ORF808P | |
| 806 | 136 aa hypothetical protein | |||
| 807 | nuclease YhcG | |||
| 808 | M | M.Bov465ORF2740P (100% identity) | M.BcaC61ORF808P | |
| 809 | R | Bov465ORF2740P (100% identity) | BcaC61ORF808P | |
| 810 | C | C.Bov465ORF2740P (100% identity) | C.BcaC61ORF808P | |
| 811 | Calcineurin-like phosphoesterase | |||
| 1809 | Phage integrase family protein | |||
| 1810 | S | S1.Bca12C61ORF316P (100% identity) | S4.BcaC61ORF1816P | |
| 1811 | S | S2.Bca12C61ORF316P (100% identity) | S3.BcaC61ORF1816P | |
| 1812 | S | S3.Bca12C61ORF316P (100% identity) | S2.BcaC61ORF1816P | |
| 1813 | S | S2.Bca100ORF2515P (68% identity) | S1.BcaC61ORF1816P | |
| 1814 | 168 aa hypothetical protein | |||
| 1815 | nuclease YhcG | |||
| 1816 | M | M.Bca12C61ORF316P (100% identity) | M.BcaC61ORF1816P | |
| 1817 | R | Bca12C61ORF316P (100% identity) | BcaC61ORF1816P | |
| 1818 | C | C.PhoHDD12ORF16045P (100% identity) | C.BcaC61ORF1816P | |
| 1819 | Phage integrase family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 866 | BRO family, N-terminal domain | |||
| 867 | M | M.Msa17ORFHP (100% identity) | M.BcaC61ORF867P | |
| 868 | protein of unknown function (DUF4248) | |||
| 1056 | Endoribonuclease YbeY | |||
| 1057 | M | M2.Bca12C61ORF3844P (100% identity) | M1.BcaC61ORF1057P | |
| 1058 | R | Bca12C61ORF3844P (100% identity) | BcaC61ORF1057P | |
| 1059 | M | M1.Bca12C61ORF3844P (100% identity) | M2.BcaC61ORF1057P | |
| 1060 | Nucleoside recognition | |||
| 1797 | exodeoxyribonuclease X | |||
| 1798 | R | Bfa513ORF7665P (100% identity) | BcaC61ORF1799P | |
| 1799 | M | M.Pdi426ORF3965P (100% identity) | M.BcaC61ORF1799P | |
| 1800 | C | C.Bth7330ORF3470P (100% identity) | C.BcaC61ORF1799P | |
| 1801 | Phage integrase family protein | |||
| 1826 | Conjugative transposon protein TraM | |||
| 1827 | M | M.PmeBin647ORFBP (100% identity) | M.BcaC61ORF1827P | |
| 1828 | Conjugative transposon protein TraN | |||
| 1951 | 115 aa hypothetical protein | |||
| ??? | M | M.Bxy566ORF12615P (100% identity) | M.BcaC61ORFAP | |
| 1953 | Phage antirepressor protein KilAC domain | |||
| 2052 | Conjugative transposon protein TraD | |||
| ??? | M | M.Bxy514ORF13035P (100% identity) | M.BcaC61ORF2053P | |
| 2056 | Toprim-like protein | |||
| 2466 | TaqI-like C-terminal specificity domain protein | |||
| 2467 | RM | BfrYORF3008P (98% identity) | BcaC61ORF2467P | |
| 2468 | helix-turn-helix protein domain protein | |||
| 3214 | Peptidase family M23 | |||
| 3215 | M | M.Bxy566ORF26605P (100% identity) | M.BcaC61ORF3215P | |
| 3216 | 317 aa hypothetical protein | |||
| 3318 | 315 aa hypothetical protein | |||
| 3319 | M | M.Bth576ORF19280P (100% identity) | M.BcaC61ORF3319P | |
| 3320 | 114 aa hypothetical protein | |||
| 3463 | 77 aa hypothetical protein | |||
| 3464 | M | M.Bca12C61ORF1989P (100% identity) | M.BcaC61ORF3464P | |
| 3465 | SNF2 family N-terminal domain protein | |||
| 3634 | Phage integrase SAM-like domain protein | |||
| 3635 | R | PmeBin35ORFAP (100% identity) | CCATC | BcaC61ORF3636P |
| 3636 | M | M2.PmeBin35ORFAP (100% identity) | CCATC | M1.BcaC61ORF3636P |
| ??? | M | M2.Bca1219ORF1940P (100% identity) | M2.BcaC61ORF3636P | |
| 3638 | Carbamoyl-phosphate synthase large chain | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3058 | Type III restriction enzyme, res subunit | |||
| 3059 | R | Bca12C61ORF1587P (100% identity) | BcaC61ORF3061P | |
| 3060 | Virulence protein RhuM family protein | |||
| 3061 | M | M.Bca12C61ORF1587P (100% identity) | M.BcaC61ORF3061P | |
| 3062 | protein of unknown function (DUF4391) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2298 | 144 aa hypothetical protein | |||
| 2299 | R | PmeBin96McrBP (100% identity) | BcaC61McrBP | |
| 2300 | R | PmeBin96McrCP (100% identity) | BcaC61McrCP | |
| 2301 | 235 aa hypothetical protein | |||