Parabacteroides distasonis CL03T12C09 |
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Putative Parabacteroides distasonis CL03T12C09 RM systems
Ref: Garcia-Bayona,L. et al. PLoS Genet 17 (4), e1009541 (2021)
REBASE ref # 31897
Complete sequence: 5,062,790 bp
GenBank #: CP072254
REBASE acronym: PdiC09
Org_num: 48573
All begin INE77_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 548 | Tn916 family transposase | |||
| 549 | S | S1.BcaH1617ORFCP (68% identity) | S4.PdiC09ORF553P | |
| 550 | S | S1.Pvu1098ORF10145P (36% identity) | S3.PdiC09ORF553P | |
| 551 | S | S3.Pdi162ORF12215P (100% identity) | S2.PdiC09ORF553P | |
| 552 | S | S3.Pdi12C09ORF261P (100% identity) | S1.PdiC09ORF553P | |
| 553 | Virulence protein RhuM family protein | |||
| 554 | M | M.Pdi244ORF10590P (100% identity) | M1.PdiC09ORF553P | |
| 555 | protein of unknown function (DUF4268) | |||
| 556 | R | Pdi244ORF10590P (100% identity) | PdiC09ORF553P | |
| 557 | C | C.Pvu1098ORF10145P (100% identity) | C.PdiC09ORF553P | |
| 558 | 359 aa hypothetical protein | |||
| 569 | ATP-dependent DNA helicase recG | |||
| 570 | M | M.PspCT06ORF17120P (100% identity) | M.PdiC09ORF570P | |
| 571 | S | S.PspCT06ORF17120P (98% identity) | S.PdiC09ORF570P | |
| 572 | protein of unknown function (DUF4145) | |||
| 573 | Abortive infection alpha | |||
| 574 | R | PspCT06ORF17120P (100% identity) | PdiC09ORF570P | |
| 575 | Bacteriophage abortive infection AbiH | |||
| 3295 | Tyrosine recombinase XerD | |||
| 3296 | S | S2.Pdi12C09ORF2714P (100% identity) | S2.PdiC09ORF3301P | |
| 3297 | S | S1.PdiS2PDORF3300P (100% identity) | S1.PdiC09ORF3301P | |
| 3298 | 143 aa hypothetical protein | |||
| 3299 | 141 aa hypothetical protein | |||
| 3300 | Virulence protein RhuM family protein | |||
| 3301 | M | M.PdiS2PDORF3300P (100% identity) | M.PdiC09ORF3301P | |
| 3302 | R | PdiS2PDORF3300P (100% identity) | PdiC09ORF3301P | |
| 3303 | C | C.PdiS2PDORF3300P (100% identity) | C.PdiC09ORF3301P | |
| 3304 | protein of unknown function (DUF4357) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24 | carbohydrate metabolism domain protein | |||
| 25 | R | PspCT06IIP (100% identity) | CCWGG | PdiC09ORF27P |
| 26 | helix-turn-helix protein domain protein | |||
| 27 | M | M.PspCT06II (100% identity) | CCWGG | M.PdiC09ORF27P |
| 28 | 1220 aa hypothetical protein | |||
| 3989 | Outer membrane protein beta-barrel domain | |||
| 3990 | M | M.PspCT06ORF21175P (99% identity) | CGCG | M.PdiC09ORF3990P |
| 3991 | R | PspCT06ORF21175P (100% identity) | CGCG | PdiC09ORF3990P |
| 3992 | Transaldolase | |||