Phocaeicola vulgatus CL06T03C24 |
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Putative Phocaeicola vulgatus CL06T03C24 RM systems
Ref: Garcia-Bayona,L. et al. PLoS Genet 17 (4), e1009541 (2021)
REBASE ref # 31897
Complete sequence: 5,298,614 bp
GenBank #: CP072234
REBASE acronym: Pvu3C24
Org_num: 48626
All begin INE85_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1044 | Protein of unknown function DUF262 | |||
| 1045 | R | PvuC06ORF3690P (100% identity) | Pvu3C24ORF1046P | |
| 1046 | M | M.Pvu1ORF22320P (100% identity) | M.Pvu3C24ORF1046P | |
| 1047 | S | S1.PvuC06ORF3690P (47% identity) | S1.Pvu3C24ORF1046P | |
| 1048 | nuclease YhcG | |||
| 1049 | S | S2.Bvu10583II (99% identity) | CYYANNNNNNNCTTG | S2.Pvu3C24ORF1046P |
| 1050 | Phage integrase family protein | |||
| ??? | S | S3.Pvu1099ORF3610P (100% identity) | S3.Pvu3C24ORF1046P | |
| 1051 | S | S4.Pvu1099ORF3610P (100% identity) | S4.Pvu3C24ORF1046P | |
| 1052 | 67 aa hypothetical protein | |||
| 1470 | helix-turn-helix protein | |||
| 1471 | R | PmeBin291ORFDP (100% identity) | Pvu3C24ORF1473P | |
| 1472 | 248 aa hypothetical protein | |||
| 1473 | M | M.PmeBin291ORFDP (100% identity) | M.Pvu3C24ORF1473P | |
| 1474 | Virulence protein RhuM family protein | |||
| 1475 | S | S3.PmeBin291ORFDP (97% identity) | S1.Pvu3C24ORF1473P | |
| ??? | S | S3.Bxy3ORF5575P (90% identity) | S2.Pvu3C24ORF1473P | |
| 1476 | S | S1.PmeBin291ORFDP (49% identity) | S3.Pvu3C24ORF1473P | |
| 1477 | S | S1.Pin2836ORF11600P (70% identity) | S4.Pvu3C24ORF1473P | |
| 1478 | Tn916 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1544 | SIR2-like domain protein | |||
| 1545 | RM | PmeBin233ORFAP (68% identity) | Pvu3C24ORF1545P | |
| 1546 | 1208 aa hypothetical protein | |||
| 2191 | 78 aa hypothetical protein | |||
| 2192 | M | M.Bdo12C06ORF3150P (99% identity) | M.Pvu3C24ORF2192P | |
| 2193 | 128 aa hypothetical protein | |||
| 2289 | protein of unknown function (DUF4373) | |||
| 2290 | M | M.PvuC06ORF2486P (100% identity) | CCWGG | M.Pvu3C24ORF2290P |
| 2291 | R | PvuC06ORF2486P (100% identity) | CCWGG | Pvu3C24ORF2290P |
| 2292 | V | V.PvuC06ORF2486P (100% identity) | V.Pvu3C24ORF2290P | |
| 2293 | 59 aa hypothetical protein | |||