Pseudomonas aeruginosa ZBX-P13 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Pseudomonas aeruginosa ZBX-P13 RM systems
Ref: Salloum,T. et al. unpublished
REBASE ref # 32258
Complete sequence: 6,878,937 bp
GenBank #: CP061778
REBASE acronym: PaeP13
Org_num: 48745
All begin IFJ79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2135 | class 1 integron integrase IntI1 | |||
| ??? | M | M.PspP16ORFEP (97% identity) | M.PaeP13ORF2145P | |
| 2150 | S | S.PaesAG1ORF5747P (100% identity) | S.PaeP13ORF2145P | |
| 2155 | 311 aa hypothetical protein | |||
| 2160 | R | PaesAG1ORF5747P (100% identity) | PaeP13ORF2145P | |
| 2165 | 263 aa hypothetical protein | |||
| 5570 | DUF91 domain-containing protein | |||
| 5575 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.PaeP13ORF5580P |
| 5580 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.PaeP13ORF5580P |
| 5585 | HNH endonuclease | |||
| 5590 | R | PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | PaeP13ORF5580P |
| 5595 | peptidase M15 | |||
| 7530 | virulence RhuM family protein | |||
| 7535 | R | SacT018ORFDP (99% identity) | CAGNNNNNNCTCG | PaeP13ORF7550P |
| 7540 | anticodon nuclease | |||
| 7545 | S | S.SacT018ORFDP (100% identity) | CAGNNNNNNCTCG | S.PaeP13ORF7550P |
| 7550 | M | M.SacT018ORFDP (100% identity) | CAGNNNNNNCTCG | M.PaeP13ORF7550P |
| 7555 | MarR family transcriptional regulator | |||
| 8065 | site-specific integrase | |||
| 8070 | M | M.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | M.PaeP13ORF8070P |
| 8075 | S | S.Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | S.PaeP13ORF8070P |
| 8080 | R | Paes32ORF100P (100% identity) | ATGNNNNNNNTCYC | PaeP13ORF8070P |
| 8085 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 930 | nucleoid-associated protein YejK | |||
| 935 | M | M.Paes32ORF1382P (100% identity) | M.PaeP13ORF935P | |
| 940 | Arc family DNA-binding protein | |||
| 7600 | DNA topoisomerase (ATP-hydrolyzing) subunit B | |||
| ??? | RM | PaeB17932ORF25P (100% identity) | PaeP13ORF7605P | |
| 7610 | 68 aa hypothetical protein | |||
| 19100 | 70 aa hypothetical protein | |||
| 19105 | M | M1.PaeM1ORF7985P (100% identity) | M.PaeP13ORF19105P | |
| 19110 | IS3 family transposase | |||
| 19600 | BREX system P-loop protein BrxC | |||
| 19605 | RM | PaeLo539ORF11980P (100% identity) | PaeP13ORF19605P | |
| 19610 | 55 aa hypothetical protein | |||
| 19620 | 62 aa hypothetical protein | |||
| 19625 | RM | Pae4528ORF18375BP (100% identity) | PaeP13ORF19625P | |
| 19630 | BREX-1 system phosphatase PglZ type A | |||
| 20915 | 185 aa hypothetical protein | |||
| 20920 | M | M.SmaICU4ORF22525P (100% identity) | M.PaeP13ORF20920P | |
| 20925 | DNA topoisomerase III | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 19650 | AIPR family protein | |||
| 19655 | M | M.Paes32ORF4058P (100% identity) | CACACC | M.PaeP13ORF19655P |
| 19660 | R | Paes32ORF4058P (100% identity) | CACACC | PaeP13ORF19655P |
| 19665 | IS3 family transposase | |||