Clostridium species C1 |
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Putative Clostridium species C1 RM systems
Ref: Hu,Y.-F. et al. unpublished
REBASE ref # 31924
Complete sequence: 3,035,113 bp
GenBank #: CP073631
REBASE acronym: CspC1
Org_num: 47146
All begin KEC48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1805 | 191 aa hypothetical protein | |||
| 1810 | R | PmeBin234ORFCP (86% identity) | CspC1ORF1820P | |
| 1815 | S | S.Fnu046I (32% identity) | S.CspC1ORF1820P | |
| 1820 | M | M.PmeBin234ORFCP (94% identity) | M.CspC1ORF1820P | |
| 1825 | helix-turn-helix transcriptional regulator | |||
| 6490 | 317 aa hypothetical protein | |||
| 6495 | R | Cin14501ORF22545P (79% identity) | CspC1ORF6530P | |
| 6500 | FRG domain-containing protein | |||
| 6505 | S | S.Fal35896ORF1041P (47% identity) | S3.CspC1ORF6530P | |
| 6510 | tyrosine-type recombinase/integrase | |||
| 6515 | 90 aa hypothetical protein | |||
| 6520 | S | S3.PmeBin45ORFEP (79% identity) | S2.CspC1ORF6530P | |
| 6525 | S | S1.BspLZLJ3ORF15150P (75% identity) | S1.CspC1ORF6530P | |
| 6530 | M | M.Rsp7A12ORF8795P (86% identity) | M.CspC1ORF6530P | |
| 6535 | helix-turn-helix transcriptional regulator | |||
| 14610 | DUF262 domain-containing protein | |||
| 14615 | M | M.Eba1738ORF5865P (63% identity) | M.CspC1ORF14615P | |
| 14620 | S | S.ChyCHY5ORF625P (42% identity) | S.CspC1ORF14615P | |
| 14625 | R | Rin31NBORF2040P (69% identity) | CspC1ORF14615P | |
| 14630 | 1238 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3375 | 70 aa hypothetical protein | |||
| 3380 | M | M.Cdi21263ORFMP (85% identity) | M.CspC1ORF3380P | |
| 3385 | 92 aa hypothetical protein | |||
| 10180 | AAA family ATPase | |||
| 10185 | M | M.EcaMAR1ORF830P (57% identity) | M.CspC1ORF10185P | |
| 10190 | 78 aa hypothetical protein | |||
| 10595 | 71 aa hypothetical protein | |||
| 10600 | R | Cpe55ORF8155P (44% identity) | CspC1ORF10605P | |
| 10605 | M | M1.Csp6137ORF1106P (58% identity) | M1.CspC1ORF10605P | |
| 10610 | M | M1.CspC1ORF10605P (52% identity) | M2.CspC1ORF10605P | |
| 10615 | 137 aa hypothetical protein | |||
| 10700 | 284 aa hypothetical protein | |||
| 10705 | V | V.PmeBin312ORFAP (77% identity) | V.CspC1ORF10715P | |
| 10710 | R | PmeBin312ORFAP (89% identity) | CspC1ORF10715P | |
| 10715 | M | M.EcyORF20750P (92% identity) | M.CspC1ORF10715P | |
| 10720 | 125 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10645 | IS21 family transposase | |||
| 10650 | R | Lla161McrCP (23% identity) | CspC1McrCP | |
| 10655 | R | Lba902McrBP (31% identity) | CspC1McrBP | |
| 10660 | sigma-70 family RNA polymerase sigma factor | |||