Mycoplasma bovis PG45.4 |
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Putative Mycoplasma bovis PG45.4 RM systems
Ref: Bokma,J. et al. unpublished
REBASE ref # 32176
Complete sequence: 1,001,444 bp
GenBank #: CP058481
REBASE acronym: Mbo454
Org_num: 48480
All begin HYD84_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1175 | 339 aa hypothetical protein | |||
| 1180 | M | M.MboVK30ORF1075P (99% identity) | M.Mbo454ORF1180P | |
| 1185 | S | S1.Mbo45VI (47% identity) | S.Mbo454ORF1180P | |
| 1190 | R | Mbo456ORF1200P (99% identity) | Mbo454ORF1180P | |
| 1195 | site-specific integrase | |||
| 1195 | site-specific integrase | |||
| 1200 | S | S2.MboTO19ORF1085P (100% identity) | S1.Mbo454ORF1200P | |
| 1205 | S | S3.Mbo452ORF1185P (100% identity) | S2.Mbo454ORF1200P | |
| 1210 | IS3 family transposase | |||
| 3015 | CTP synthase | |||
| ??? | R | Mbo455ORF3105AP (100% identity) | Mbo454ORF3075AP | |
| 3065 | IS3 family transposase | |||
| 3070 | R | Mbo457ORF3080BP (100% identity) | Mbo454ORF3075BP | |
| 3075 | M | M.Mbo456ORF3095P (99% identity) | M.Mbo454ORF3075P | |
| 3080 | 86 aa hypothetical protein | |||
| ??? | S | S1.Mbo457ORF3080P (98% identity) | S1.Mbo454ORF3075P | |
| 3095 | tyrosine-type recombinase/integrase | |||
| ??? | S | S2.Mbo458ORF3085P (90% identity) | S2.Mbo454ORF3075P | |
| 3110 | IS3 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1820 | DNA polymerase III subunit delta | |||
| 1825 | M | M.MboVK8ORF1730P (100% identity) | CTAG | M.Mbo454ORF1825P |
| 1830 | R | MbosMb1ORF1625P (100% identity) | CTAG | Mbo454ORF1825P |
| 1835 | DUF285 domain-containing protein | |||
| 2325 | 150 aa hypothetical protein | |||
| 2330 | M | M.MboF9160ORF2825P (100% identity) | M.Mbo454ORF2330P | |
| 2335 | R | Mbo459ORF2375P (100% identity) | Mbo454ORF2330P | |
| 2340 | excinuclease ABC subunit UvrB | |||
| 2785 | 30S ribosomal protein S2 | |||
| 2790 | R | MboF9160ORF470P (100% identity) | GATC | Mbo454ORF2795P |
| 2795 | M | M.Mbo459ORF2840P (100% identity) | GATC | M.Mbo454ORF2795P |
| 2800 | variable surface lipoprotein | |||
| 3305 | 62 aa hypothetical protein | |||
| 3310 | M | M.Mbo452ORF3320P (100% identity) | M.Mbo454ORF3310P | |
| 3315 | ribonuclease HIII | |||
| 3595 | AAA family ATPase | |||
| 3600 | R | Mbo5152ORF3555P (100% identity) | Mbo454ORF3610P | |
| ??? | DNA adenine methylase | |||
| 3610 | M | M1.MboF9160ORF1550P (100% identity) | GCATC | M.Mbo454ORF3610P |
| 3615 | 30S ribosomal protein S16 | |||
| 3600 | AlwI family type II restriction endonuclease | |||
| ??? | M | M1.Mbos193ORF3440P (72% identity) | M.Mbo454ORF3605P | |
| 3610 | DNA adenine methylase | |||
| 3825 | YigZ family protein | |||
| 3835 | R | R2.MboF9160ORF1295P (89% identity) | GANTC | Mbo454ORF3850AP |
| 3840 | IS30-like element ISMbov1 family transposase | |||
| 3845 | R | Mbo459ORF3895BP (100% identity) | GANTC | Mbo454ORF3850BP |
| 3850 | M | M.Mbo455ORF3890P (100% identity) | GANTC | M.Mbo454ORF3850P |
| 3855 | MFS transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 805 | IS30 family transposase | |||
| 810 | R | Mbo459ORF810P (100% identity) | Mbo454ORF815P | |
| 815 | M | M1.Mbo452ORF810P (100% identity) | M1.Mbo454ORF815P | |
| 820 | M | M2.Mbo7ORF780P (99% identity) | M2.Mbo454ORF815P | |
| ??? | M | M3.Mbo162ORF770P (96% identity) | M3.Mbo454ORF815P | |
| 835 | trigger factor | |||
| 3720 | Fic family protein | |||
| 3725 | M | M1.Mbos183ORF3410P (100% identity) | M1.Mbo454ORF3725P | |
| 3730 | M | M1.Mbos185ORF3450P (27% identity) | M2.Mbo454ORF3725P | |
| 3735 | M | M2.MboVK15ORF3465P (40% identity) | M3.Mbo454ORF3725P | |
| 3740 | M | M2.Mbo45ORF743P (21% identity) | M4.Mbo454ORF3725P | |
| 3745 | IS3 family transposase | |||