Escherichia coli 3347558 |
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Putative Escherichia coli 3347558 RM systems
Ref: Moser,A.I. et al. unpublished
REBASE ref # 31808
| Sequence length: | GenBank #: | |
| Chromosome: | 5,164,876 bp | CP071073 |
| plasmid p3347558_1: | 169,082 bp | CP071074 |
| plasmid p3347558_2: | 129,523 bp | CP071075 |
| plasmid p3347558_3: | 93,750 bp | CP071076 |
| plasmid p3347558_4: | 64,917 bp | CP071077 |
REBASE acronym: Eco558
Org_num: 46509
All begin JY392_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2850 | endoribonuclease SymE | |||
| 2855 | S | S.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | S.Eco558ORF2860P |
| 2860 | M | M.Ecos69ORF1130P (100% identity) | AACNNNNNNGTGC | M.Eco558ORF2860P |
| 2865 | R | Ecoo241ORF21620P (100% identity) | AACNNNNNNGTGC | Eco558ORF2860P |
| 2870 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1165 | helix-turn-helix domain-containing protein | |||
| 1170 | M | M.KaeCRE8ORF15605P (100% identity) | M.Eco558ORF1170P | |
| 1175 | 71 aa hypothetical protein | |||
| 10060 | recombination protein NinB | |||
| 10065 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.Eco558ORF10065P |
| 10070 | NinE family protein | |||
| 14295 | drug/metabolite exporter YedA | |||
| 14300 | V | V.Ecostr9DcmP (74% identity) | V.Eco558DcmP | |
| 14305 | M | M.EcosE1DcmP (100% identity) | CCWGG | M.Eco558DcmP |
| 14310 | phosphohydrolase | |||
| 21470 | DNA-binding transcriptional regulator Fis | |||
| 21475 | M | M.Eco30256ORF20885P (100% identity) | ATGCAT | M.Eco558ORF21475P |
| 21480 | DUF2556 family protein | |||
| 22000 | ribulose-phosphate 3-epimerase | |||
| 22005 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco558DamP |
| 22010 | cell division protein DamX | |||
| plasmid p3347558_1 | ||||
| 25205 | 120 aa hypothetical protein | |||
| 25210 | M | M.Vch11614ORFCP (100% identity) | M.Eco558ORF25210P | |
| 25215 | 149 aa hypothetical protein | |||
| 25570 | 100 aa hypothetical protein | |||
| 25575 | M | M.YrupYR1ORFCP (100% identity) | M.Eco558ORF25575P | |
| 25580 | 143 aa hypothetical protein | |||
| plasmid p3347558_2 | ||||
| 26245 | IS1 family transposase | |||
| 26250 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Eco558ORF26250P |
| 26255 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco558ORF26250P |
| 26260 | EAL domain-containing protein | |||
| plasmid p3347558_3 | ||||
| 26815 | 103 aa hypothetical protein | |||
| 26820 | M | M.EcoREF1ORF26250P (100% identity) | M.Eco558ORF26820P | |
| 26825 | 73 aa hypothetical protein | |||
| plasmid p3347558_4 | ||||
| 27285 | 97 aa hypothetical protein | |||
| 27290 | M | M.Xca80ORFEP (100% identity) | M.Eco558ORF27290P | |
| 27295 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2840 | R | Ecoo241McrCP (100% identity) | Eco558McrCP | |
| 2845 | R | SenHNK130McrBP (100% identity) | Eco558McrBP | |
| 2850 | endoribonuclease SymE | |||
| 2865 | type I restriction-modification system | |||
| 2870 | R | Ssp28760MrrP (100% identity) | Eco558MrrP | |
| 2875 | GTPase | |||