Prevotella denticola F0115 |
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Putative Prevotella denticola F0115 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 1,887,130 bp | CP072374 |
| chromosome 2: | 1,214,840 bp | CP072375 |
REBASE acronym: PdeF0115
Org_num: 48646
All begin J4866_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 510 | 50 aa hypothetical protein | |||
| 515 | S | S3.Tsp286ORF8345P (62% identity) | S4.PdeF0115ORF540P | |
| 520 | tyrosine-type recombinase/integrase | |||
| 525 | S | S3.Pni630IIP (93% identity) | S3.PdeF0115ORF540P | |
| 530 | S | S3.Tfo92A2ORF1962P (51% identity) | S2.PdeF0115ORF540P | |
| 535 | DUF1016 family protein | |||
| 540 | M | M.Pni630II (99% identity) | M.PdeF0115ORF540P | |
| 545 | R | Pni630IIP (97% identity) | PdeF0115ORF540P | |
| 550 | 155 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 4685 | HD domain-containing protein | |||
| 4690 | R | Pin1653ORF10970P (58% identity) | PdeF0115ORF4695P | |
| 4695 | M | M.Pin2834ORF1385P (68% identity) | M.PdeF0115ORF4695P | |
| 4700 | DUF1599 domain-containing protein | |||
| chromosome 2 | ||||
| 8000 | 80 aa hypothetical protein | |||
| 8005 | M | M.Psa15606ORF2325P (83% identity) | M.PdeF0115ORF8005P | |
| 8010 | thymidylate synthase | |||
| 8140 | 349 aa hypothetical protein | |||
| 8145 | RM | PdeF0288ORF11070P (99% identity) | PdeF0115ORF8145P | |
| 8150 | DEAD/DEAH box helicase family protein | |||
| 8595 | class I SAM-dependent DNA methyltransferase | |||
| 8600 | RM | Pin17ORF429P (97% identity) | PdeF0115ORF8600P | |
| 8605 | SNF2/RAD54 family helicase | |||
| 11890 | flavodoxin domain-containing protein | |||
| 11895 | M | M.PdeF0119ORF5945P (99% identity) | M.PdeF0115ORF11895P | |
| 11900 | R | PdeF0119ORF5945P (99% identity) | PdeF0115ORF11895P | |
| 11905 | alpha-amylase | |||
| 12310 | replication-associated recombination protein A | |||
| 12315 | R | PdeF0119ORF6240P (99% identity) | PdeF0115ORF12320P | |
| 12320 | M | M.PdeF0119ORF6240P (100% identity) | M.PdeF0115ORF12320P | |
| 7565 | 70 aa hypothetical protein | |||