Prevotella histicola F0411 |
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Putative Prevotella histicola F0411 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,083,653 bp | CP072367 |
| chromosome 2: | 915,861 bp | CP072368 |
REBASE acronym: PhiF0411
Org_num: 48650
All begin J5A62_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 8765 | YtxH domain-containing protein | |||
| 8770 | R | Psc2052ORF11210P (96% identity) | GAGNNNNRTTG | PhiF0411IIP |
| 8775 | S | S.Pme0516ORF2725P (60% identity) | GAGNNNNRTTG | S.PhiF0411II |
| 8780 | M | M.PjeF0106IV (98% identity) | GAGNNNNRTTG | M.PhiF0411II |
| 8785 | 2-dehydropantoate 2-reductase | |||
| 11105 | restriction endonuclease subunit S | |||
| 11110 | S | S4.Pgi3102ORF5540P (80% identity) | S4.PhiF0411IIIP | |
| 11115 | tyrosine-type recombinase/integrase | |||
| 11120 | S | S2.BfrBFG1ORF17740P (65% identity) | S3.PhiF0411IIIP | |
| 11125 | S | S2.Pbu13063ORF2589P (56% identity) | GAGNNNNNTAC | S2.PhiF0411III |
| 11130 | 155 aa hypothetical protein | |||
| 11135 | S | S1.Pgi3102ORF5540P (96% identity) | S1.PhiF0411IIIP | |
| 11140 | M | M.Pgi1oldORF6055P (99% identity) | GAGNNNNNTAC | M.PhiF0411III |
| 11145 | R | Pgi1oldORF6055P (99% identity) | GAGNNNNNTAC | PhiF0411IIIP |
| 11150 | helix-turn-helix transcriptional regulator | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 9245 | 89 aa hypothetical protein | |||
| 9250 | M | M.AmuORF325P (68% identity) | M.PhiF0411ORF9250P | |
| 9255 | 360 aa hypothetical protein | |||
| 11665 | Holliday junction branch migration protein RuvA | |||
| 11670 | M | M2.PdeF0105ORF9775P (76% identity) | M1.PhiF0411ORF11670P | |
| 11675 | 186 aa hypothetical protein | |||
| 11680 | 76 aa hypothetical protein | |||
| 11685 | R | R1.Bhe78512ORF2320P (75% identity) | PhiF0411ORF11670P | |
| 11690 | M | M1.PspE225ORF6905P (70% identity) | M2.PhiF0411ORF11670P | |
| 11695 | DUF1735 and LamG domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1550 | alpha-L-fucosidase | |||
| 1555 | M | M.Psc361BIV (92% identity) | CGGTA | M.PhiF0411I |
| 1560 | R | PspF0648ORF11900P (94% identity) | CGGTA | PhiF0411IP |
| 1565 | TIGR02391 family protein | |||