Prevotella melaninogenica F0299 |
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Putative Prevotella melaninogenica F0299 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 2,182,615 bp | CP072354 |
| chromosome 2: | 1,430,726 bp | CP072355 |
REBASE acronym: Pme0299
Org_num: 48657
All begin J5A68_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 1990 | 102 aa hypothetical protein | |||
| 1995 | M | M.Pme0301I (99% identity) | M.Pme0299ORF1995P | |
| 2000 | S | S.Pme1567ORF5960P (56% identity) | S.Pme0299ORF1995P | |
| 2005 | R | Pme0300IP (98% identity) | Pme0299ORF1995P | |
| 2010 | 214 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 880 | site-specific DNA-methyltransferase | |||
| 885 | M | M.Pme0300ORF7095P (99% identity) | M.Pme0299ORF885P | |
| 890 | phospholipase D family protein | |||
| 2680 | DEAD/DEAH box helicase | |||
| 2685 | M | M.BunC07ORF3409P (78% identity) | M.Pme0299ORF2685P | |
| 2690 | 192 aa hypothetical protein | |||
| 3370 | thymidylate synthase | |||
| 3375 | M | M.Pin2832ORF6205P (79% identity) | M.Pme0299ORF3375P | |
| 3380 | 80 aa hypothetical protein | |||
| 5395 | thymidylate synthase | |||
| 5400 | M | M.Pme0299ORF9055P (100% identity) | M.Pme0299ORF5400P | |
| 5405 | 80 aa hypothetical protein | |||
| 5985 | HNH endonuclease | |||
| 5990 | M | M.Bst121ORF1120P (57% identity) | M.Pme0299ORF5990P | |
| 5995 | IS3 family transposase | |||
| 6310 | 138 aa hypothetical protein | |||
| 6315 | M | M.Pme1567ORF6660P (99% identity) | M.Pme0299ORF6315P | |
| 6320 | 109 aa hypothetical protein | |||
| chromosome 2 | ||||
| 9050 | 80 aa hypothetical protein | |||
| 9055 | M | M.Pme0299ORF5400P (100% identity) | M.Pme0299ORF9055P | |
| 9060 | thymidylate synthase | |||
| 11355 | Eco57I restriction-modification methylase | |||
| 11360 | M | CspKC1668ORF5000P (31% identity) | M.Pme0299ORF11360P | |
| 11365 | master DNA invertase Mpi family serine-type | |||
| 11500 | DGQHR domain-containing protein | |||
| 11505 | M | M.Pme0301II (99% identity) | GATC | M.Pme0299I |
| 11510 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 875 | GIY-YIG nuclease family protein | |||
| 880 | M | M.Pme0300ORF7100P (99% identity) | M.Pme0299ORF880P | |
| 885 | DNA adenine methylase | |||
| chromosome 2 | ||||
| 10685 | helix-turn-helix transcriptional regulator | |||
| 10690 | R | PspF0043ORF12400P (98% identity) | Pme0299ORF10700P | |
| 10695 | 148 aa hypothetical protein | |||
| 10700 | M | M.HspA332ORF31535P (22% identity) | M.Pme0299ORF10700P | |
| 10705 | 61 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 10970 | SusF/SusE family outer membrane protein | |||
| 10975 | R | Pme760McrCP (97% identity) | Pme0299McrCP | |
| 10980 | R | Pme1567McrBP (95% identity) | Pme0299McrBP | |
| 10985 | 104 aa hypothetical protein | |||