Prevotella melaninogenica F0300 |
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Putative Prevotella melaninogenica F0300 RM systems
Ref: Johnston,C.D. et al. unpublished
REBASE ref # 31062
| Sequence length: | GenBank #: | |
| chromosome 1: | 1,967,710 bp | CP072351 |
| chromosome 2: | 1,361,496 bp | CP072352 |
REBASE acronym: Pme0300
Org_num: 48658
All begin J5A57_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 5990 | 214 aa hypothetical protein | |||
| 5995 | R | Pme0299ORF1995P (98% identity) | CCANNNNNNNTTAC | Pme0300IP |
| 6000 | S | S.PmeGA1ORF1101P (59% identity) | CCANNNNNNNTTAC | S.Pme0300I |
| 6005 | M | M.PspF0648II (98% identity) | CCANNNNNNNTTAC | M.Pme0300I |
| 6010 | 102 aa hypothetical protein | |||
| chromosome 2 | ||||
| 9730 | DUF1735 and LamG domain-containing protein | |||
| 9735 | R | Pme0516ORF2725P (97% identity) | GAGNNNNRTTA | Pme0300IIP |
| 9740 | S | S.PmeOORF7006P (64% identity) | GAGNNNNRTTA | S.Pme0300II |
| 9745 | M | M.Pme0516ORF2725P (98% identity) | GAGNNNNRTTA | M.Pme0300II |
| 9750 | IS1634 family transposase | |||
| 13335 | DUF882 domain-containing protein | |||
| 13340 | S | S3.Psc361BIP (90% identity) | S4.Pme0300IIIP | |
| ??? | S | S3.Pme0301IIIP (94% identity) | S3.Pme0300IIIP | |
| 13350 | S | S2.Pme0301IIIP (84% identity) | S2.Pme0300IIIP | |
| ??? | S | S3.Tfo92A2ORF1962P (45% identity) | GAGNNNNNNNTTC | S1.Pme0300III |
| 13360 | M | M.Pme0301III (98% identity) | GAGNNNNNNNTTC | M.Pme0300III |
| 13365 | R | Pme0301IIIP (99% identity) | GAGNNNNNNNTTC | Pme0300IIIP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2885 | 219 aa hypothetical protein | |||
| 2890 | M | M.Pme0091ORF560P (88% identity) | M.Pme0300ORF2890P | |
| 2895 | 182 aa hypothetical protein | |||
| 4945 | 192 aa hypothetical protein | |||
| 4950 | M | M.Pme0301ORF3075P (96% identity) | M.Pme0300ORF4950P | |
| 4955 | DEAD/DEAH box helicase | |||
| 5570 | 80 aa hypothetical protein | |||
| 5575 | M | M.Pme0091ORF1490P (97% identity) | M.Pme0300ORF5575P | |
| 5580 | DUF4846 domain-containing protein | |||
| 7090 | phospholipase D family protein | |||
| 7095 | M | M.Pme0299ORF885P (99% identity) | M.Pme0300ORF7095P | |
| 7100 | site-specific DNA-methyltransferase | |||
| chromosome 2 | ||||
| 9340 | ATP-binding protein | |||
| 9345 | R | PenI (78% identity) | Pme0300ORF9350P | |
| 9350 | M | M.Pin2069ORF11800P (68% identity) | M.Pme0300ORF9350P | |
| 9355 | helix-turn-helix transcriptional regulator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 7095 | DNA adenine methylase | |||
| 7100 | M | M.Pme0299ORF880P (99% identity) | M.Pme0300ORF7100P | |
| 7105 | GIY-YIG nuclease family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 2 | ||||
| 8665 | 104 aa hypothetical protein | |||
| 8670 | R | Pme1567McrBP (96% identity) | Pme0300McrBP | |
| 8675 | R | Pme0299McrCP (97% identity) | Pme0300McrCP | |
| 8680 | SusF/SusE family outer membrane protein | |||