Escherichia coli O128ac:H12 AW1.7 |
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Putative Escherichia coli O128ac:H12 AW1.7 RM systems
Ref: Guragain,M. and Bosilevac,J.M. unpublished
REBASE ref # 31839
| Sequence length: | GenBank #: | |
| Chromosome: | 4,947,577 bp | CP072539 |
| plasmid pAW1.7_1: | 103,129 bp | CP072540 |
REBASE acronym: EcoAW17
Org_num: 46668
All begin J7886_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20850 | IS1 family transposase | |||
| 20855 | M | M.EcosAW17ORF20460P (100% identity) | M.EcoAW17ORF20855P | |
| 20860 | S | S.EcosAW17ORF20460P (100% identity) | S.EcoAW17ORF20855P | |
| 20865 | SIR2 family protein | |||
| 21680 | DUF262 domain-containing protein | |||
| 21685 | M | M.EcosAW17ORF21290P (100% identity) | M.EcoAW17ORF21685P | |
| 21690 | S | S.EcosAW17ORF21290P (100% identity) | S.EcoAW17ORF21685P | |
| 21695 | R | EcosAW17ORF21290P (100% identity) | EcoAW17ORF21685P | |
| 21700 | 112 aa hypothetical protein | |||
| plasmid pAW1.7_1 | ||||
| 24290 | 3-phosphatase | |||
| 24295 | R | EcosAW17ORF24440P (100% identity) | TAAYNNNNNNTTYG | EcoAW17ORF24305P |
| 24300 | S | S.EcosAW17ORF24440P (100% identity) | TAAYNNNNNNTTYG | S.EcoAW17ORF24305P |
| 24305 | M | M.EcosAW17ORF24440P (100% identity) | TAAYNNNNNNTTYG | M.EcoAW17ORF24305P |
| 24310 | type II toxin-antitoxin system Phd/YefM family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 705 | ATP-dependent helicase | |||
| 710 | RM | Eko6ORF460P (100% identity) | EcoAW17ORF710P | |
| 715 | tyrosine-type recombinase/integrase | |||
| 2370 | cell division protein DamX | |||
| 2375 | M | M.EcosAW17DamP (100% identity) | GATC | M.EcoAW17DamP |
| 2380 | ribulose-phosphate 3-epimerase | |||
| 2995 | DUF2556 family protein | |||
| 3000 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.EcoAW17ORF3000P |
| 3005 | DNA-binding transcriptional regulator Fis | |||
| 10170 | phosphohydrolase | |||
| 10175 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoAW17DcmP |
| 10180 | V | V.SflFF59DcmP (100% identity) | V.EcoAW17DcmP | |
| 10185 | drug/metabolite exporter YedA | |||
| 18850 | ATP-binding protein | |||
| 18855 | M | M.EcosAW17ORF18460P (100% identity) | M.EcoAW17ORF18855P | |
| 18860 | TIGR02646 family protein | |||
| 21870 | 177 aa hypothetical protein | |||
| 21875 | M | M.SglORF828P (100% identity) | M.EcoAW17ORF21875P | |
| 21880 | holin | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 100 | 108 aa hypothetical protein | |||
| 105 | M | M.EcosAW17ORF23610BP (100% identity) | M.EcoAW17ORF105P | |
| 110 | R | EcosAW17ORF23610P (100% identity) | EcoAW17ORF105P | |
| 115 | IS3 family transposase | |||
| 19220 | Cd(II)/Pb(II)-responsive transcriptional | |||
| 19225 | M | M.Sen5006ORF16245P (100% identity) | M.EcoAW17ORF19225P | |
| 19230 | R | Sen80013ORF11280P (100% identity) | EcoAW17ORF19225P | |
| 19235 | IS1 family transposase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pAW1.7_1 | ||||
| 24045 | IS110 family transposase | |||
| 24050 | R | PgeFB2McrC2P (100% identity) | EcoAW17McrCP | |
| 24055 | R | KpnM9111McrBP (100% identity) | EcoAW17McrBP | |
| 24060 | IS3-like element ISKpn38 family transposase | |||