Flavobacterium species CS20 |
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Putative Flavobacterium species CS20 RM systems
Ref: Liu,G. and Sun,C. unpublished
REBASE ref # 31106
Complete sequence: 3,064,238 bp
GenBank #: CP073015
REBASE acronym: FspCS20
Org_num: 47774
All begin IGB25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 95 | 160 aa hypothetical protein | |||
| 100 | M | M.EmaRN62ORF8870P (81% identity) | M.FspCS20ORF100P | |
| 105 | S | S1.Rsl19594ORF5271P (56% identity) | S1.FspCS20ORF100P | |
| 110 | S | S2.Pli11ORF14135P (38% identity) | S2.FspCS20ORF100P | |
| 115 | 57 aa hypothetical protein | |||
| 120 | 79 aa hypothetical protein | |||
| 125 | 115 aa hypothetical protein | |||
| 130 | R | Msp64092ORF6645P (74% identity) | FspCS20ORF100P | |
| 135 | 109 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 330 | 102 aa hypothetical protein | |||
| 335 | RM | Est183ORF12880P (78% identity) | FspCS20ORF335P | |
| 340 | tyrosine-type recombinase/integrase | |||
| 3840 | Fic family protein | |||
| 3845 | M | M.Fsp414ORF6140P (61% identity) | M.FspCS20ORF3845P | |
| 3850 | 44 aa hypothetical protein | |||
| 5130 | 190 aa hypothetical protein | |||
| 5135 | C | C.LblMEDORF12059P (98% identity) | C.FspCS20ORF5140P | |
| 5140 | M | M1.LblMEDORF12059P (96% identity) | M1.FspCS20ORF5140P | |
| 5145 | M | M2.LblMEDORF12059P (97% identity) | M2.FspCS20ORF5140P | |
| 5150 | R | LblMEDORF12059P (97% identity) | FspCS20ORF5140P | |
| 5155 | group II intron reverse transcriptase/maturase | |||
| 5365 | SDR family oxidoreductase | |||
| ??? | RM | Dli5ac10ORF31300P (30% identity) | FspCS20ORF5370P | |
| 5380 | 288 aa hypothetical protein | |||
| 5525 | signal recognition particle-docking protein | |||
| 5530 | M | M.OspYSORF9765P (86% identity) | M.FspCS20ORF5530P | |
| 5535 | HNH endonuclease | |||
| 5630 | 73 aa hypothetical protein | |||
| 5635 | R | MyuLY01ORF4245P (83% identity) | FspCS20ORF5640P | |
| 5640 | M | M.FpsF22ORF3975P (66% identity) | M.FspCS20ORF5640P | |
| 5645 | C | C.Tme13764ORF4210P (84% identity) | C.FspCS20ORF5640P | |
| 5650 | Gfo/Idh/MocA family oxidoreductase | |||
| 7925 | 352 aa hypothetical protein | |||
| 7930 | M | M.NbaLBB01ORF4405P (64% identity) | M.FspCS20ORF7930P | |
| 7935 | R | PmeBin8ORFBP (58% identity) | FspCS20ORF7930P | |
| 7940 | dipeptidase PepE | |||
| 8065 | ATP-binding protein | |||
| 8070 | M | M.CspJ200ORF3100P (78% identity) | M.FspCS20ORF8070P | |
| 8075 | 380 aa hypothetical protein | |||
| 8720 | 209 aa hypothetical protein | |||
| 8725 | M | M.MhuII (53% identity) | M.FspCS20ORF8725P | |
| 8730 | MMPL family transporter | |||
| 8940 | L-histidine N(alpha)-methyltransferase | |||
| 8945 | M | M.Mtr4126ORF1760P (80% identity) | M.FspCS20ORF8945P | |
| 8950 | R | Est183ORF3790P (74% identity) | FspCS20ORF8945P | |
| 8955 | polysaccharide deacetylase family protein | |||
| 10425 | 652 aa hypothetical protein | |||
| 10430 | M | M.Cly8139DndEP (56% identity) | M.FspCS20DndEP | |
| 10435 | DNA sulfur modification protein DndD | |||
| 10430 | DndE family protein | |||
| 10435 | M | M.FcoB6DndDP (56% identity) | M.FspCS20DndDP | |
| 10440 | DNA phosphorothioation system sulfurtransferase | |||
| 10435 | DNA sulfur modification protein DndD | |||
| 10440 | M | M.Cly8139DndCP (76% identity) | M.FspCS20DndCP | |
| 10445 | 97 aa hypothetical protein | |||
| 11110 | transposase | |||
| 11115 | RM | SspT436ORF17060P (62% identity) | FspCS20ORF11115P | |
| 11120 | DNA binding domain-containing protein | |||
| 11240 | bifunctional folylpolyglutamate | |||
| 11245 | M | M.Efa16811ORF6660P (70% identity) | M.FspCS20ORF11245P | |
| 11250 | R | Fsp4HI (52% identity) | FspCS20ORF11245P | |
| 11255 | tyrosine recombinase XerD | |||
| 14410 | UvrD-helicase domain-containing protein | |||
| 14415 | R | PspRP9ORF9510P (90% identity) | FspCS20ORF14420P | |
| 14420 | M | M.PspRP9ORF9510P (91% identity) | M.FspCS20ORF14420P | |
| 14425 | C | C.UbaSCBORF14710P (90% identity) | C.FspCS20ORF14420P | |
| 14430 | 174 aa hypothetical protein | |||
| 14490 | peptide-methionine (S)-S-oxide reductase MsrA | |||
| 14495 | R | Orh223ORF7395P (79% identity) | FspCS20ORF14500P | |
| 14500 | M | M.Orh223ORF7395P (78% identity) | M.FspCS20ORF14500P | |
| 14505 | sigma-54-dependent Fis family transcriptional | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3630 | 213 aa hypothetical protein | |||
| ??? | R | Psp13PAORF10920P (91% identity) | FspCS20ORF3655P | |
| 3645 | GxxExxY protein | |||
| 3650 | KilA-N domain-containing protein | |||
| 3655 | M | M.Pbe10535ORF1000P (48% identity) | M.FspCS20ORF3655P | |
| 3660 | helix-turn-helix transcriptional regulator | |||