Escherichia coli EC2341 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli EC2341 RM systems
Ref: Li,X. unpublished
REBASE ref # 22399
| Sequence length: | GenBank #: | |
| Chromosome: | 4,769,833 bp | CP072976 |
| plasmid pEC2341_2: | 144,818 bp | CP072977 |
| plasmid pEC2341_3: | 107,480 bp | CP072978 |
| plasmid pEC2341_KPC-2: | 76,592 bp | CP072979 |
REBASE acronym: Eco2341
Org_num: 46550
All begin KBW65_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 15585 | IS1 family transposase | |||
| 15590 | R | Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | Eco2341ORF15600P |
| 15595 | S | S.Sen12509ORF5865P (100% identity) | ACAYNNNNCTG | S.Eco2341ORF15600P |
| ??? | M | M.EcoVL02ORF7370P (100% identity) | ACAYNNNNCTG | M.Eco2341ORF15600P |
| 15605 | integrase core domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6285 | phage lysis protein EssD | |||
| 6290 | M | M.Sso63633ORF22290P (100% identity) | M.Eco2341ORF6290P | |
| 6295 | 67 aa hypothetical protein | |||
| 11785 | cell division protein DamX | |||
| 11790 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco2341DamP |
| 11795 | ribulose-phosphate 3-epimerase | |||
| 12415 | DUF2556 family protein | |||
| 12420 | M | M.Ssp28760ORF20045P (100% identity) | ATGCAT | M.Eco2341ORF12420P |
| 12425 | DNA-binding transcriptional regulator Fis | |||
| 19260 | phosphohydrolase | |||
| 19265 | M | M.SflSTLE1DcmP (100% identity) | CCWGG | M.Eco2341DcmP |
| 19270 | V | V.SflFF64DcmP (100% identity) | V.Eco2341DcmP | |
| 19275 | drug/metabolite exporter YedA | |||
| plasmid pEC2341_2 | ||||
| 23525 | 73 aa hypothetical protein | |||
| 23530 | M | M.KpnVA569ORF28145P (100% identity) | M.Eco2341ORF23530P | |
| 23535 | 102 aa hypothetical protein | |||
| plasmid pEC2341_3 | ||||
| 24065 | 73 aa hypothetical protein | |||
| 24070 | M | M.SflC32ORFDP (100% identity) | SAY | M.Eco2341ORF24070P |
| 24075 | 103 aa hypothetical protein | |||
| plasmid pEC2341_KPC-2 | ||||
| 24615 | IS1 family transposase | |||
| 24620 | M | M.SflLIN11ORF24665P (100% identity) | CCWGG | M.Eco2341ORF24620P |
| 24625 | R | YpsR1ORFAP (100% identity) | CCWGG | Eco2341ORF24620P |
| 24630 | EAL domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 290 | isocitrate dehydrogenase | |||
| 295 | R | EcosEC27McrCP (100% identity) | Eco2341McrCP | |
| 300 | R | EcoteDMcrBP (100% identity) | Eco2341McrBP | |
| 305 | recombinase family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1855 | replication endonuclease | |||
| 1860 | M | M.Sen663ORF16605P (100% identity) | GATC | M.Eco2341ORF1860P |
| 1865 | TraR/DksA family transcriptional regulator | |||