Thiothrix species AS |
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Putative Thiothrix species AS RM systems
Ref: Ravin,N.V. et al. unpublished
REBASE ref # 32481
Complete sequence: 4,284,843 bp
GenBank #: CP072801
REBASE acronym: TspAS
Org_num: 49561
All begin J9253_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2870 | ISAs1 family transposase | |||
| 2875 | R | Tla21227ORFNP (18% identity) | TspASORF2890AP | |
| 2880 | IS4 family transposase | |||
| 2885 | R | Tla21227ORFNP (42% identity) | TspASORF2890BP | |
| 2890 | M | M.Tla21227ORFNP (99% identity) | M.TspASORF2890P | |
| 2895 | S | S.Pch133ORF2538P (61% identity) | S.TspASORF2890P | |
| 2900 | AAA family ATPase | |||
| 5170 | NAD(P)-binding protein | |||
| 5175 | M | M.TlaMK1ORF330P (99% identity) | M.TspASORF5175P | |
| 5180 | Fic family protein | |||
| 5185 | S | S.Dac2973ORF1334P (27% identity) | S1.TspASORF5175P | |
| 5195 | S | S.VfuMT14ORF14840P (38% identity) | S2.TspASORF5175P | |
| 5200 | 87 aa hypothetical protein | |||
| 5205 | SPOR domain-containing protein | |||
| 5210 | TIR domain-containing protein | |||
| 5215 | R | Tla21227ORFBP (96% identity) | TspASORF5175P | |
| 5220 | M48 family metallopeptidase | |||
| 7120 | nitrogen fixation protein NifX | |||
| 7125 | R | TlaWSORF17770P (99% identity) | TspASORF7130P | |
| 7130 | M | M.TspQ5ORF13275P (98% identity) | M.TspASORF7130P | |
| 7135 | S | S1.TspQ5ORF13275P (98% identity) | S1.TspASORF7130P | |
| 7140 | 84 aa hypothetical protein | |||
| 7145 | type II toxin-antitoxin system VapC family | |||
| 7150 | S | S.TspA52ORF13790P (44% identity) | S2.TspASORF7130P | |
| 7155 | argonaute PAZ domain-containing protein | |||
| 9185 | CidA/LrgA family protein | |||
| 9190 | R | TlaWSORF15330P (99% identity) | TspASORF9230P | |
| 9195 | DUF3037 domain-containing protein | |||
| 9200 | transposase | |||
| 9205 | S | S3.TlaWSORF15330P (92% identity) | S3.TspASORF9230P | |
| 9210 | S | S.AinTQ23ORFCP (41% identity) | S2.TspASORF9230P | |
| 9215 | S | S1.TlaWSORF15330P (100% identity) | S1.TspASORF9230P | |
| 9220 | DUF3368 domain-containing protein | |||
| 9225 | type II toxin-antitoxin system Phd/YefM family | |||
| 9230 | M | M.TlaWSORF15330P (99% identity) | M.TspASORF9230P | |
| 9235 | carbonic anhydrase | |||
| 16135 | Fertility inhibition FinO | |||
| 16140 | R | TspQ5ORF10015P (96% identity) | TspASORF16175P | |
| 16145 | toxin-antitoxin system HicB family antitoxin | |||
| 16150 | S | S2.PspPS1M3ORF22070P (65% identity) | S2.TspASORF16175P | |
| 16155 | DUF3368 domain-containing protein | |||
| 16160 | UPF0175 family protein | |||
| 16165 | S | S.AsaNS1ORF10960P (60% identity) | S1.TspASORF16175P | |
| 16170 | Abi family protein | |||
| 16175 | M | M.TspQ5ORF10015P (86% identity) | M.TspASORF16175P | |
| 16180 | 111 aa hypothetical protein | |||
| 16550 | lactate utilization protein | |||
| 16555 | R | PspN3WORF24150P (73% identity) | TspASORF16580P | |
| 16560 | Fic family protein | |||
| 16565 | S | S.Cst7417ORF4792P (46% identity) | S.TspASORF16580P | |
| 16570 | PIN domain-containing protein | |||
| 16575 | 95 aa hypothetical protein | |||
| 16580 | M | M.EspT1ORF16855P (68% identity) | M.TspASORF16580P | |
| 16585 | HAD hydrolase family protein | |||
| 18305 | Lrp/AsnC family transcriptional regulator | |||
| ??? | S | S.Ama1002ORFFP (36% identity) | S.TspASORF18315P | |
| 18315 | M | M.Tla21227ORFOP (96% identity) | M.TspASORF18315P | |
| 18320 | type II toxin-antitoxin system VapC family | |||
| 18325 | AbrB/MazE/SpoVT family DNA-binding | |||
| 18330 | R | Tla21227ORFOP (98% identity) | TspASORF18315P | |
| 18335 | 2-isopropylmalate synthase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1470 | type II toxin-antitoxin system VapB family | |||
| 1475 | RM | TlaWSORF13805P (93% identity) | TspASORF1475P | |
| 1480 | transposase | |||
| 11800 | 545 aa hypothetical protein | |||
| 11805 | RM | TsuDNT53ORFLP (82% identity) | TspASORF11805P | |
| 11810 | 190 aa hypothetical protein | |||
| 14705 | cyclic nucleotide-binding/CBS domain-containing | |||
| 14710 | R | TlaMK1ORF10390P (95% identity) | TspASORF14715P | |
| 14715 | M | M.TlaMK1ORF10390P (98% identity) | M.TspASORF14715P | |
| 14720 | lipopolysaccharide heptosyltransferase II | |||
| 14750 | GTPase ObgE | |||
| 14755 | R | Tni5205ORFJP (36% identity) | TspASORF14760P | |
| 14760 | M | M.Tca21228ORF666P (80% identity) | M.TspASORF14760P | |
| 14765 | 50S ribosomal protein L27 | |||
| 14915 | ribonucleotide-diphosphate reductase subunit | |||
| 14920 | R | TspA52ORF6015P (92% identity) | TspASORF14925P | |
| 14925 | M | M.Tca21228ORF438P (77% identity) | M.TspASORF14925P | |
| 14930 | 92 aa hypothetical protein | |||
| 15395 | 222 aa hypothetical protein | |||
| 15400 | M | M.TspQ5ORF12525P (90% identity) | M.TspASORF15400P | |
| 15405 | 3(2),5-bisphosphate nucleotidase CysQ | |||
| 16405 | quinolinate synthase NadA | |||
| 16410 | M | M.TlaMK1ORF9770P (99% identity) | M.TspASORF16410P | |
| 16415 | R | TlaMK1ORF9770P (99% identity) | TspASORF16410P | |
| 16420 | DEAD/DEAH box helicase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1620 | type II toxin-antitoxin system RelE/ParE family | |||
| 1625 | R | TlaWSMrrP (100% identity) | TspASMrrP | |
| 1630 | GlsB/YeaQ/YmgE family stress response membrane | |||