Enterococcus faecium VB3378 |
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Putative Enterococcus faecium VB3378 RM systems
Ref: Balaji,V. et al. unpublished
REBASE ref # 31793
| Sequence length: | GenBank #: | |
| Chromosome: | 2,792,149 bp | CP072707 |
| plasmid pVB3378_p1: | 227,172 bp | CP072708 |
| plasmid pVB3378_p2: | 44,920 bp | CP072709 |
| plasmid pVB3378_p5: | 17,300 bp | CP072712 |
REBASE acronym: EfaB3378
Org_num: 47688
All begin J7155_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8995 | 235 aa hypothetical protein | |||
| 9000 | M | M.Ela9003ORF14870P (100% identity) | M.EfaB3378ORF9000P | |
| 9005 | S | S.Efav1ORF3815P (100% identity) | S.EfaB3378ORF9000P | |
| 9010 | R | Efav1ORF3815P (100% identity) | EfaB3378ORF9000P | |
| 9015 | helix-turn-helix domain-containing protein | |||
| plasmid pVB3378_p1 | ||||
| 13735 | SinI family restriction endonuclease | |||
| 13740 | M | M.EfaVRE1ORF270P (100% identity) | CYYANNNNNNNTGAY | M.EfaB3378ORF13740P |
| 13745 | S | S.EfaVRE1ORF270P (96% identity) | CYYANNNNNNNTGAY | S.EfaB3378ORF13740P |
| 13750 | IS110 family transposase | |||
| 13755 | R | EfaVRE1ORF270P (100% identity) | CYYANNNNNNNTGAY | EfaB3378ORF13740P |
| 13760 | IS6-like element IS1216 family transposase | |||
| plasmid pVB3378_p5 | ||||
| 15530 | recombinase family protein | |||
| 15450 | M | M.EfasCORFAP (97% identity) | M.EfaB3378ORF15450P | |
| 15455 | RNA-directed DNA polymerase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5550 | 54 aa hypothetical protein | |||
| 5555 | M | M.Era49464ORF15900P (100% identity) | M.EfaB3378ORF5555P | |
| 5560 | 96 aa hypothetical protein | |||
| plasmid pVB3378_p2 | ||||
| 14910 | recombinase family protein | |||
| 14915 | M | M.Efa3378ORF14945P (100% identity) | M.EfaB3378ORF14915P | |
| 14920 | R | Efa3378ORF14945P (100% identity) | EfaB3378ORF14915P | |
| 14925 | 122 aa hypothetical protein | |||