Escherichia coli BW25113 frmA KO wo pUD9 |
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Putative Escherichia coli BW25113 frmA KO wo pUD9 RM systems
Ref: Bennett,R.K. et al. unpublished
REBASE ref # 31812
Complete sequence: 4,632,807 bp
GenBank #: CP072661
REBASE acronym: Eco25113A
Org_num: 46530
All begin J8Z31_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 22025 | endoribonuclease SymE | |||
| 22030 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.Eco25113AORF22035P |
| 22035 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.Eco25113AORF22035P |
| 22040 | R | EcoW25113ORF11385P (100% identity) | AACNNNNNNGTGC | Eco25113AORF22035P |
| 22045 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10030 | drug/metabolite exporter YedA | |||
| 10035 | V | V.SflFF64DcmP (100% identity) | V.Eco25113ADcmP | |
| 10040 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.Eco25113ADcmP |
| 10045 | phosphohydrolase | |||
| 16525 | DNA-binding transcriptional regulator Fis | |||
| 16530 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco25113AORF16530P |
| 16535 | DUF2556 family protein | |||
| 17150 | ribulose-phosphate 3-epimerase | |||
| 17155 | M | M.UbaC1152DamP (100% identity) | GATC | M.Eco25113ADamP |
| 17160 | cell division protein DamX | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5865 | site-specific DNA recombinase | |||
| 5870 | R | SsoSE61ORF22640P (100% identity) | YCGR | Eco25113AORF5870P |
| 5875 | isocitrate dehydrogenase | |||
| 22010 | 978 aa hypothetical protein | |||
| 22015 | R | SenHNK130McrCP (100% identity) | Eco25113AMcrCP | |
| 22020 | R | SenHNK130McrBP (100% identity) | Eco25113AMcrBP | |
| 22025 | endoribonuclease SymE | |||
| 22040 | type I restriction-modification system | |||
| 22045 | R | SenHNK130MrrP (100% identity) | Eco25113AMrrP | |
| 22050 | GTPase | |||