Escherichia coli O19:H7 730V1 |
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Putative Escherichia coli O19:H7 730V1 RM systems
Ref: Guragain,M. et al. Appl Environ Microbiol 87 (7), e02343-20 (2021)
REBASE ref # 31845
Complete sequence: 5,113,454 bp
GenBank #: CP061764
REBASE acronym: Eco730V1
Org_num: 46734
All begin ID627_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6070 | 112 aa hypothetical protein | |||
| 6075 | R | KpnwHHEORF5380P (99% identity) | Eco730V1ORF6085P | |
| 6080 | S | S.KpnwHHEORF5380P (99% identity) | S.Eco730V1ORF6085P | |
| ??? | M | M.Eco99CORF5580P (100% identity) | M.Eco730V1ORF6085P | |
| 6090 | transposase | |||
| 12325 | M48 family metallopeptidase | |||
| 12330 | R | Sen9981ORF11670P (99% identity) | TCAGNNNNNNTGC | Eco730V1ORF12345P |
| 12335 | YecA family protein | |||
| 12340 | S | S.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | S.Eco730V1ORF12345P |
| 12345 | M | M.SenSMo01ORF8345P (100% identity) | TCAGNNNNNNTGC | M.Eco730V1ORF12345P |
| 12350 | TonB-dependent receptor | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1770 | cell division protein DamX | |||
| 1775 | M | M.SspPIBDamP (100% identity) | GATC | M.Eco730V1DamP |
| 1780 | ribulose-phosphate 3-epimerase | |||
| 2395 | DUF2556 family protein | |||
| 2400 | M | M.Ssp28760ORF20045P (99% identity) | ATGCAT | M.Eco730V1ORF2400P |
| 2405 | DNA-binding transcriptional regulator Fis | |||
| 3540 | DEAD/DEAH box helicase | |||
| 3545 | RM | Sma1978ORFHP (99% identity) | CTTGAC | Eco730V1ORF3545P |
| 3550 | IS66 family transposase | |||
| 4175 | DUF2441 domain-containing protein | |||
| 4180 | M | M.SenA1673ORF20475P (100% identity) | M.Eco730V1ORF4180P | |
| 4185 | 88 aa hypothetical protein | |||
| 9895 | phosphohydrolase | |||
| 9900 | M | M.EcoC388DcmP (100% identity) | CCWGG | M.Eco730V1DcmP |
| 9905 | V | V.EcoSFE8DcmP (100% identity) | V.Eco730V1DcmP | |
| 9910 | drug/metabolite exporter YedA | |||
| 12565 | 177 aa hypothetical protein | |||
| 12570 | M | M.SglORF828P (100% identity) | M.Eco730V1ORF12570P | |
| 12575 | holin | |||
| 19225 | phage lysis protein EssD | |||
| 19230 | M | M.Sso63633ORF22290P (100% identity) | M.Eco730V1ORF19230P | |
| 19235 | 67 aa hypothetical protein | |||
| 19260 | LexA family transcriptional regulator | |||
| 19265 | M | M.Sso63633ORF22325P (100% identity) | GATC | M.Eco730V1ORF19265P |
| 19270 | PerC family transcriptional regulator | |||
| 19625 | DUF1317 family protein | |||
| 19630 | M | M.CfrNIH4ORF1670P (46% identity) | M.Eco730V1ORF19630P | |
| 19635 | Dam family site-specific | |||
| 19630 | DNA cytosine methyltransferase | |||
| 19635 | M | M.Eho286ORF14775P (99% identity) | M.Eco730V1ORF19635P | |
| 19640 | DUF4060 family protein | |||
| 22535 | RM | Eco444ORFGP (93% identity) | Eco730V1ORF22535P | |
| 22540 | DEAD/DEAH box helicase | |||
| 23410 | phage holin, lambda family | |||
| 23415 | M | M.Eco732ORF15450P (99% identity) | M.Eco730V1ORF23415P | |
| 23420 | 67 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3360 | inovirus Gp2 family protein | |||
| 3365 | R | SenLASSORF19350P (100% identity) | Eco730V1ORF3370P | |
| 3370 | M | M.Sen5006ORF16245P (100% identity) | M.Eco730V1ORF3370P | |
| 3375 | Cd(II)/Pb(II)-responsive transcriptional | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8905 | tail fiber assembly protein | |||
| 8910 | R | Eco34C16ORF125P (100% identity) | Eco730V1ORF8910P | |
| 8915 | 604 aa hypothetical protein | |||
| 14675 | isocitrate dehydrogenase | |||
| 14680 | R | Ecos671McrCP (100% identity) | Eco730V1McrCP | |
| 14685 | R | EcoGR02AMcrBP (100% identity) | Eco730V1McrBP | |
| 14690 | tail fiber assembly protein | |||
| 22670 | IS3-like element ISKpn38 family transposase | |||
| 22675 | R | KpnM9111McrBP (100% identity) | Eco730V1McrB2P | |
| 22680 | R | PgeFB2McrC2P (100% identity) | Eco730V1McrC2P | |
| 22685 | IS110 family transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24430 | DUF4406 domain-containing protein | |||
| 24435 | M | M.KspBL05ORF46540P (99% identity) | M.Eco730V1ORF24435P | |
| 24440 | 70 aa hypothetical protein | |||