Escherichia coli ECONC427 |
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Putative Escherichia coli ECONC427 RM systems
Ref: Kilic,A. et al. J Glob Antimicrob Resist (2021) In press
REBASE ref # 31822
| Sequence length: | GenBank #: | |
| Chromosome: | 5,025,496 bp | CP071133 |
| plasmid p1_ECONC427: | 233,336 bp | CP071135 |
REBASE acronym: EcoEC427
Org_num: 46554
All begin JYS20_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9590 | endoribonuclease SymE | |||
| 9595 | S | S.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | S.EcoEC427ORF9600P |
| 9600 | M | M.EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | M.EcoEC427ORF9600P |
| 9605 | R | EcosS1ORF16790P (100% identity) | CCANNNNNNNCTTC | EcoEC427ORF9600P |
| 9610 | adenine/cytosine-specific restriction | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3790 | DNA-binding transcriptional regulator Fis | |||
| ??? | M | M.Ecos69ORF20890P (100% identity) | ATGCAT | M.EcoEC427ORF3795P |
| 3800 | DUF2556 family protein | |||
| 4320 | ribulose-phosphate 3-epimerase | |||
| 4325 | M | M.Ecos69DamP (100% identity) | GATC | M.EcoEC427DamP |
| 4330 | cell division protein DamX | |||
| 14735 | replication endonuclease | |||
| 14740 | R | Ecostr10ORF20P (100% identity) | GRGCYC | EcoEC427ORF14750P |
| 14745 | C | C.Sen24590ORF20925P (100% identity) | C.EcoEC427ORF14750P | |
| 14750 | M | M.Ecostr10ORF20P (100% identity) | M.EcoEC427ORF14750P | |
| 14755 | phage portal protein | |||
| 16095 | recombination protein NinB | |||
| 16100 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoEC427ORF16100P |
| 16105 | NinE family protein | |||
| 20350 | drug/metabolite exporter YedA | |||
| 20355 | V | V.Ecos53DcmP (100% identity) | V.EcoEC427DcmP | |
| 20360 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.EcoEC427DcmP |
| 20365 | phosphohydrolase | |||
| plasmid p1_ECONC427 | ||||
| 25275 | 55 aa hypothetical protein | |||
| 25280 | M | M.YpsF1ORFCP (100% identity) | M.EcoEC427ORF25280P | |
| 25285 | thermonuclease family protein | |||
| 25770 | 48 aa hypothetical protein | |||
| 25775 | M | M.YpsF1ORFBP (97% identity) | M.EcoEC427ORF25775P | |
| 25780 | 202 aa hypothetical protein | |||
| 25900 | DNA-binding protein | |||
| 25905 | M | M.YpsF1ORFDP (100% identity) | M.EcoEC427ORF25905P | |
| 25910 | zinc finger-like domain-containing protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9605 | type I restriction-modification system | |||
| 9610 | R | EcosS1MrrP (100% identity) | EcoEC427MrrP | |
| 9615 | GTPase | |||