Xenorhabdus budapestensis C-7-2 |
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Putative Xenorhabdus budapestensis C-7-2 RM systems
Ref: LI,B. et al. unpublished
REBASE ref # 32521
Complete sequence: 4,366,413 bp
GenBank #: CP072455
REBASE acronym: XbuC72
Org_num: 49857
All begin HGO23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2555 | nucleotidyl transferase AbiEii/AbiGii toxin | |||
| 2560 | M | M.XneXORFGP (99% identity) | M.XbuC72ORF2560P | |
| 2565 | S | S2.Xsp857ORF17370P (50% identity) | S.XbuC72ORF2560P | |
| 2570 | R | XneXORFGP (98% identity) | XbuC72ORF2560P | |
| 2575 | integrase domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 330 | ribulose-phosphate 3-epimerase | |||
| 335 | M | M.XnePDamP (90% identity) | M.XbuC72DamP | |
| 340 | SPOR domain-containing protein | |||
| 3975 | 100 aa hypothetical protein | |||
| 3980 | M | M.AspaPbORF4335P (64% identity) | M.XbuC72ORF3980P | |
| 3985 | 143 aa hypothetical protein | |||
| 4100 | 66 aa hypothetical protein | |||
| 4105 | M | M.Xsp857ORF2595P (90% identity) | M.XbuC72ORF4105P | |
| 4110 | 46 aa hypothetical protein | |||
| 4355 | 66 aa hypothetical protein | |||
| 4360 | M | M.Xgr1ORF15690P (96% identity) | M.XbuC72ORF4360P | |
| 4365 | DUF2829 domain-containing protein | |||
| 5205 | IS1182 family transposase | |||
| 5210 | RM | PcyNE1ORF2705P (87% identity) | XbuC72ORF5210P | |
| 5215 | ATP-dependent helicase | |||
| 11375 | 66 aa hypothetical protein | |||
| 11380 | M | M.XnePORF3088P (83% identity) | M.XbuC72ORF11380P | |
| 11385 | replication endonuclease | |||
| 11385 | replication endonuclease | |||
| 11390 | M | M.Xgr1ORF14295P (81% identity) | M.XbuC72ORF11390P | |
| 11395 | 135 aa hypothetical protein | |||
| 12735 | 58 aa hypothetical protein | |||
| 12740 | M | M.XspTCT1ORF22650P (83% identity) | M.XbuC72ORF12740P | |
| 12745 | 75 aa hypothetical protein | |||
| 17170 | AbrB/MazE/SpoVT family DNA-binding | |||
| 17175 | R | Xdo16ORF691P (87% identity) | XbuC72ORF17175P | |
| 17180 | spermidine/putrescine ABC transporter | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 110 | 184 aa hypothetical protein | |||
| 115 | R | XhoANU1ORF15300P (93% identity) | XbuC72ORF120P | |
| 120 | M | M.XhoANU1ORF15300P (92% identity) | M1.XbuC72ORF120P | |
| 125 | M | M.Xgr1ORF18860P (91% identity) | M2.XbuC72ORF120P | |
| 130 | transposase | |||
| 6205 | phage holin, lambda family | |||
| 6210 | M | M.XbuC72ORF12920P (87% identity) | M.XbuC72ORF6210P | |
| 6220 | antitermination protein | |||
| 12915 | DNA adenine methylase | |||
| 12920 | M | M.XbuC72ORF6210P (87% identity) | M.XbuC72ORF12920P | |
| 12925 | phage holin, lambda family | |||