Escherichia coli LWY6 |
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Putative Escherichia coli LWY6 RM systems
Ref: Yuan,L. and Li,W. unpublished
REBASE ref # 30549
Complete sequence: 4,933,433 bp
GenBank #: CP072204
REBASE acronym: EcoLWY6
Org_num: 46657
All begin J4T81_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 20880 | AAA family ATPase | |||
| 20885 | S | S.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | S.EcoLWY6ORF20890P |
| 20890 | M | M.SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | M.EcoLWY6ORF20890P |
| 20895 | R | SspZ54ORF5015P (100% identity) | TGANNNNNNCTTC | EcoLWY6ORF20890P |
| 20900 | transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1675 | cell division protein DamX | |||
| 1680 | M | M.EcosEC71DamP (100% identity) | GATC | M.EcoLWY6DamP |
| 1685 | ribulose-phosphate 3-epimerase | |||
| 2230 | DUF2556 family protein | |||
| 2235 | M | M.SspS13ORF21055P (100% identity) | ATGCAT | M.EcoLWY6ORF2235P |
| 2240 | DNA-binding transcriptional regulator Fis | |||
| 8935 | phosphohydrolase | |||
| 8940 | M | M.EcosEC71DcmP (100% identity) | CCWGG | M.EcoLWY6DcmP |
| 8945 | V | V.EcosEC71DcmP (100% identity) | V.EcoLWY6DcmP | |
| 8950 | drug/metabolite exporter YedA | |||
| 16615 | NinE family protein | |||
| 16620 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoLWY6ORF16620P |
| 16625 | recombination protein NinB | |||
| 19845 | HNH endonuclease | |||
| 19850 | R | EcoPK8566ORF2340P (100% identity) | EcoLWY6ORF19850P | |
| 19855 | 332 aa hypothetical protein | |||
| 19870 | BREX system P-loop protein BrxC | |||
| 19875 | RM | EcosEC71ORF19770P (97% identity) | EcoLWY6ORF19875P | |
| 19880 | acetolactate synthase small subunit | |||
| 21755 | phage holin, lambda family | |||
| 21760 | M | M.SflLIN17ORF17405P (100% identity) | M.EcoLWY6ORF21760P | |
| 21765 | 67 aa hypothetical protein | |||
| 21790 | LexA family transcriptional regulator | |||
| 21795 | M | M.Efe41C20ORF1660P (100% identity) | GATC | M.EcoLWY6ORF21795P |
| 21800 | PerC family transcriptional regulator | |||