Escherichia coli ABW_S22 |
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Putative Escherichia coli ABW_S22 RM systems
Ref: Biggel,M. unpublished
REBASE ref # 31800
| Sequence length: | GenBank #: | |
| Chromosome: | 4,664,222 bp | CP067274 |
| plasmid pABW_S22c: | 44,769 bp | CP067278 |
| plasmid unnamed: | 28,722 bp | CP067280 |
| plasmid unnamed: | 4,183 bp | CP067287 |
REBASE acronym: EcoS22
Org_num: 46523
All begin JJB12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 11240 | 322 aa hypothetical protein | |||
| 11245 | R | EcoWS38ORF11185P (100% identity) | EcoS22ORF11250P | |
| 11250 | M | M.EcoWS38ORF11185P (100% identity) | M.EcoS22ORF11250P | |
| 11255 | S | S.EcoWS38ORF11185P (100% identity) | S.EcoS22ORF11250P | |
| 11260 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 700 | phosphohydrolase | |||
| 705 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoS22DcmP |
| 710 | V | V.EcoWS38DcmP (100% identity) | V.EcoS22DcmP | |
| 715 | drug/metabolite exporter YedA | |||
| 1245 | conserved phage C-terminal domain-containing | |||
| 1250 | M | M.EcoZE21ORF10305P (99% identity) | M.EcoS22ORF1250P | |
| 1255 | RusA family crossover junction | |||
| 1285 | TrmB family transcriptional regulator | |||
| 1290 | M | M.EcoZE21ORF10265P (100% identity) | M.EcoS22ORF1290P | |
| 1295 | holin | |||
| 4985 | NinE family protein | |||
| 4990 | M | M.SflWW1ORF7070P (100% identity) | GATC | M.EcoS22ORF4990P |
| 4995 | recombination protein NinB | |||
| 15940 | cell division protein DamX | |||
| 15945 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoS22DamP |
| 15950 | ribulose-phosphate 3-epimerase | |||
| 16565 | DUF2556 family protein | |||
| 16570 | M | M.EcoWS38ORF16505P (100% identity) | ATGCAT | M.EcoS22ORF16570P |
| 16575 | tyrosine-type recombinase/integrase | |||
| plasmid pABW_S22c | ||||
| 24275 | recombinase family protein | |||
| 24280 | R | Ssp3CORF24390P (100% identity) | CCWGG | EcoS22ORF24285P |
| 24285 | M | M.EcoSK3ORF24890P (100% identity) | CCWGG | M.EcoS22ORF24285P |
| 24290 | IS1 family transposase | |||
| plasmid unnamed | ||||
| 24780 | 76 aa hypothetical protein | |||
| 24785 | M | M.Sen3039ORF24445P (100% identity) | M.EcoS22ORF24785P | |
| 24790 | DNA polymerase III subunit beta | |||
| plasmid unnamed | ||||
| 25175 | IS1 family transposase | |||
| 25180 | M | M.EcoSK3ORF22595P (100% identity) | CCWGG | M.EcoS22ORF25180P |
| ??? | R | EcoSK3ORF22595P (96% identity) | CCWGG | EcoS22ORF25180P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4790 | isocitrate dehydrogenase | |||
| 4795 | R | EcosEC27McrCP (100% identity) | EcoS22McrCP | |
| 4800 | R | EcoteDMcrBP (100% identity) | EcoS22McrBP | |
| 4805 | tail fiber assembly protein | |||
| 11260 | endoribonuclease SymE | |||
| 11265 | R | EcoWS38GmrSDP (100% identity) | EcoS22GmrSDP | |
| 11270 | DUF1127 domain-containing protein | |||