Escherichia coli H20 MIN6 |
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Putative Escherichia coli H20 MIN6 RM systems
Ref: Majewski,P. Front Microbiol (2021) In press
REBASE ref # 31831
| Sequence length: | GenBank #: | |
| Chromosome: | 4,989,754 bp | CP069692 |
| plasmid pMUB-MIN6-1: | 89,956 bp | CP069693 |
| plasmid pMUB-MIN6-3: | 6,293 bp | CP069696 |
REBASE acronym: EcoMIN6
Org_num: 46649
All begin JSU10_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20540 | DUF4942 domain-containing protein | |||
| 20545 | M | M.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | M.EcoMIN6ORF20545P |
| 20550 | S | S.SsoSE61ORF6540P (100% identity) | GACNNNNNNRTAAY | S.EcoMIN6ORF20545P |
| 20555 | R | SflFF22ORF2075P (100% identity) | GACNNNNNNRTAAY | EcoMIN6ORF20545P |
| 20565 | NADPH-dependent aldehyde reductase Ahr | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1810 | cell division protein DamX | |||
| 1815 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMIN6DamP |
| 1820 | ribulose-phosphate 3-epimerase | |||
| 2340 | DUF2556 family protein | |||
| 2345 | M | M.SflWW1ORF2205P (100% identity) | ATGCAT | M.EcoMIN6ORF2345P |
| 2350 | DNA-binding transcriptional regulator Fis | |||
| 6030 | PerC family transcriptional regulator | |||
| 6035 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.EcoMIN6ORF6035P |
| 6040 | LexA family transcriptional regulator | |||
| 9655 | phosphohydrolase | |||
| 9660 | M | M.SflN107DcmP (100% identity) | CCWGG | M.EcoMIN6DcmP |
| 9665 | V | V.EcoSFE8DcmP (100% identity) | V.EcoMIN6DcmP | |
| 9670 | drug/metabolite exporter YedA | |||
| 15500 | replication endonuclease | |||
| 15505 | M | M.EcoSFE8ORF15905P (100% identity) | M.EcoMIN6ORF15505P | |
| 15510 | TraR/DksA family transcriptional regulator | |||
| 21420 | IS3 family transposase | |||
| 21425 | R | SflFF80ORF21000P (100% identity) | YGGCCR | EcoMIN6ORF21430P |
| 21430 | M | M.SflFF80ORF21000P (100% identity) | YGGCCR | M.EcoMIN6ORF21430P |
| 21435 | integrase | |||
| plasmid pMUB-MIN6-1 | ||||
| 24295 | 73 aa hypothetical protein | |||
| 24300 | M | M.UbapRSB107ORFAP (100% identity) | SAY | M.EcoMIN6ORF24300P |
| 24305 | 102 aa hypothetical protein | |||
| plasmid pMUB-MIN6-3 | ||||
| 25020 | R | EcoSCU484ORF25120P (100% identity) | GATATC | EcoMIN6ORF25030P |
| 25025 | C | C.EcoSCU484ORF25120P (100% identity) | CCCATTTTGGG | C.EcoMIN6ORF25030P |
| 25030 | M | M.EcoSCU484ORF25120P (100% identity) | GATATC | M.EcoMIN6ORF25030P |
| 25035 | Rop family plasmid primer RNA-binding protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6230 | recombinase family protein | |||
| 6235 | R | EcoWP2GmrSDP (96% identity) | EcoMIN6GmrSDP | |
| 6240 | DinI-like family protein | |||