Escherichia coli O89m:H9 MIN11 |
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Putative Escherichia coli O89m:H9 MIN11 RM systems
Ref: Majewski,P. Front Microbiol (2021) In press
REBASE ref # 31831
| Sequence length: | GenBank #: | |
| Chromosome: | 4,768,306 bp | CP069666 |
| plasmid pMUB-MIN11-2: | 74,912 bp | CP069668 |
| plasmid pMUB-MIN11-6: | 4,286 bp | CP069673 |
REBASE acronym: EcoMIN11
Org_num: 46741
All begin JSU13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5380 | IS1 family transposase | |||
| 5385 | R | Ror24150ORF17255P (100% identity) | EcoMIN11ORF5400P | |
| 5390 | S | S.Ror24150ORF17255P (67% identity) | S.EcoMIN11ORF5400P | |
| 5395 | IS5-like element IS903B family transposase | |||
| ??? | M | M.KpnS1313ORF16435P (99% identity) | M.EcoMIN11ORF5400P | |
| 5405 | ParB N-terminal domain-containing protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1615 | cell division protein DamX | |||
| 1620 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoMIN11DamP |
| 1625 | ribulose-phosphate 3-epimerase | |||
| 2250 | DUF2556 family protein | |||
| 2255 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoMIN11ORF2255P |
| 2260 | DNA-binding transcriptional regulator Fis | |||
| 8710 | phosphohydrolase | |||
| 8715 | M | M.SspS13DcmP (100% identity) | CCWGG | M.EcoMIN11DcmP |
| 8720 | V | V.SsoSE61DcmP (100% identity) | V.EcoMIN11DcmP | |
| 8725 | drug/metabolite exporter YedA | |||
| 17020 | BREX system P-loop protein BrxC | |||
| 17025 | RM | EcoPE15ORF17615P (100% identity) | EcoMIN11ORF17025P | |
| 17030 | BREX-1 system phosphatase PglZ type A | |||
| 18675 | phage lysis protein EssD | |||
| 18680 | M | M.Sso63633ORF22290P (100% identity) | M.EcoMIN11ORF18680P | |
| 18685 | 67 aa hypothetical protein | |||
| 18710 | LexA family transcriptional regulator | |||
| 18715 | M | M.Sso30ORF925P (100% identity) | GATC | M.EcoMIN11ORF18715P |
| 18720 | PerC family transcriptional regulator | |||
| 19090 | HNH endonuclease | |||
| 19095 | R | SflSTLE4ORF19250P (100% identity) | EcoMIN11ORF19095P | |
| 19100 | McrC family protein | |||
| 19280 | sigma 54-interacting transcriptional regulator | |||
| 19285 | R | SflFF87ORF20150P (100% identity) | EcoMIN11ORF19285P | |
| 19290 | IS21-like element IS100 family transposase | |||
| 19445 | ProQ/FinO family protein | |||
| 19450 | M | M.SflFF24DndBP (100% identity) | M.EcoMIN11DndBP | |
| 19455 | DNA phosphorothioation system sulfurtransferase | |||
| 19450 | DNA sulfur modification protein DndB | |||
| 19455 | M | M.SflFF24DndCP (100% identity) | M.EcoMIN11DndCP | |
| 19460 | DNA sulfur modification protein DndD | |||
| 19455 | DNA phosphorothioation system sulfurtransferase | |||
| 19460 | M | M.SflFF24DndDP (100% identity) | M.EcoMIN11DndDP | |
| 19465 | DNA sulfur modification protein DndE | |||
| 19460 | DNA sulfur modification protein DndD | |||
| 19465 | M | M.SflFF24DndEP (100% identity) | M.EcoMIN11DndEP | |
| 19470 | DGQHR domain-containing protein | |||
| 19480 | accessory gene regulator B family protein | |||
| 19485 | R | EcosEC5DptHP (100% identity) | EcoMIN11DptHP | |
| 19490 | DNA phosphorothioation-dependent restriction | |||
| 19490 | R | SflFF24DptGP (100% identity) | EcoMIN11DptGP | |
| 19495 | DNA phosphorothioation-dependent restriction | |||
| 19490 | DNA phosphorothioation-dependent restriction | |||
| 19495 | R | SflFF24DptFP (100% identity) | EcoMIN11DptFP | |
| 19500 | porin family protein | |||
| plasmid pMUB-MIN11-2 | ||||
| 23325 | 103 aa hypothetical protein | |||
| 23330 | M | M.Ecos69ORF26765P (100% identity) | M.EcoMIN11ORF23330P | |
| 23335 | 73 aa hypothetical protein | |||
| plasmid pMUB-MIN11-6 | ||||
| 24020 | R | Efe33C07ORF24365P (100% identity) | EcoMIN11ORF24015P | |
| 24025 | Rop family plasmid primer RNA-binding protein | |||
| 24015 | M | M.Efe33C07ORF24365P (100% identity) | M.EcoMIN11ORF24015P | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 8555 | prepilin-type N-terminal cleavage/methylation | |||
| 8560 | R | EcoO81ORFBP (98% identity) | CCGAG | EcoMIN11ORF8565P |
| 8565 | M | M.KquC3001ORF9710P (99% identity) | CCGAG | M.EcoMIN11ORF8565P |
| 8570 | SpnT protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19095 | HNH endonuclease | |||
| 19100 | R | SflSTLE4McrCP (100% identity) | EcoMIN11McrCP | |
| 19105 | R | SflSTLE4McrBP (100% identity) | EcoMIN11McrBP | |
| 19110 | DUF4942 domain-containing protein | |||