Geobacter species Jerry-YX |
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Putative Geobacter species Jerry-YX RM systems
Ref: Li,Y. unpublished
REBASE ref # 24350
Complete sequence: 3,583,698 bp
GenBank #: CP071382
REBASE acronym: GspYX
Org_num: 47785
All begin JZM60_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6480 | M48 family metallopeptidase | |||
| 6485 | R | TspsG1ORF54P (80% identity) | GspYXORF6510P | |
| 6490 | nucleotidyltransferase | |||
| 6495 | patatin-like phospholipase family protein | |||
| 6500 | S | S2.Psp054ORF26165P (61% identity) | S.GspYXORF6510P | |
| 6505 | virulence RhuM family protein | |||
| 6510 | M | M.TspsG1ORF54P (88% identity) | M.GspYXORF6510P | |
| 6515 | 191 aa hypothetical protein | |||
| 10550 | YajD family HNH nuclease | |||
| 10555 | R | MpaEORF901P (62% identity) | GspYXORF10560P | |
| 10560 | M | M.Doe16959ORF3003P (71% identity) | M.GspYXORF10560P | |
| 10565 | S | S.PcoTLP2ORF20540P (33% identity) | S.GspYXORF10560P | |
| 10570 | helix-turn-helix domain-containing protein | |||
| 15045 | 348 aa hypothetical protein | |||
| 15050 | R | GsuOSK2AORF14790P (96% identity) | GspYXORF15060P | |
| 15055 | S | S.GsuOSK2AORF14790P (58% identity) | S.GspYXORF15060P | |
| 15060 | M | M.GsuOSK2AORF14790P (94% identity) | M.GspYXORF15060P | |
| 15065 | IS630 family transposase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12590 | AAA family ATPase | |||
| 12595 | RM | Nco17730ORF12935P (52% identity) | GspYXORF12595P | |
| 12600 | 176 aa hypothetical protein | |||
| 14540 | winged helix-turn-helix transcriptional | |||
| 14545 | R | Awi1911ORF30570P (47% identity) | GspYXORF14560P | |
| 14550 | V | V.ApuAALORFCP (65% identity) | V.GspYXORF14560P | |
| 14555 | 79 aa hypothetical protein | |||
| 14560 | M | M.DspWTLORF532P (61% identity) | M.GspYXORF14560P | |
| 14565 | DUF456 domain-containing protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 9910 | DUF445 family protein | |||
| 9915 | M | M.DspMNS0ORF18205P (68% identity) | M.GspYXORF9915P | |
| 9920 | AAA family ATPase | |||
| 9925 | DUF4276 family protein | |||
| 9930 | R | Gsp9736ORF1335P (88% identity) | GspYXORF9915P | |
| 9935 | hypoxanthine-guanine phosphoribosyltransferase | |||