Burkholderia pseudomallei VBP21885 |
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Putative Burkholderia pseudomallei VBP21885 RM systems
Ref: Balaji,V. et al. unpublished
REBASE ref # 31793
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,049,558 bp | CP071759 |
| chromosome 2: | 3,171,004 bp | CP071760 |
REBASE acronym: BpsP21885
Org_num: 46486
All begin J3J51_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 8855 | monooxygenase | |||
| 8860 | M | M.Bps3253ORF2230P (100% identity) | CGGANNNNNNNTGG | M.BpsP21885ORF8860P |
| 8865 | S | S.Bps3253ORF2230P (100% identity) | CGGANNNNNNNTGG | S.BpsP21885ORF8860P |
| 8870 | R | Bps21885ORF16955P (100% identity) | CGGANNNNNNNTGG | BpsP21885ORF8860P |
| 8875 | M48 family metallopeptidase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 180 | DNA topoisomerase III | |||
| 185 | M | M.Bps21885ORF7265P (100% identity) | M.BpsP21885ORF185P | |
| 190 | 81 aa hypothetical protein | |||
| 5320 | tyrosine-type recombinase/integrase | |||
| 5325 | M | M.Bps2514ORF22870P (100% identity) | M.BpsP21885ORF5325P | |
| 5335 | ClpXP protease specificity-enhancing factor | |||
| 6485 | DUF3732 domain-containing protein | |||
| 6490 | M | M.Bps2514ORF21580P (98% identity) | M.BpsP21885ORF6490P | |
| 6495 | 816 aa hypothetical protein | |||
| 6525 | 54 aa hypothetical protein | |||
| 6530 | R | Bsp617ORF930P (100% identity) | BpsP21885ORF6535P | |
| 6535 | M | M.Bsp852ORF1300P (100% identity) | M.BpsP21885ORF6535P | |
| 6540 | V | V.Bps2514ORF21540P (100% identity) | V.BpsP21885ORF6535P | |
| 6545 | 77 aa hypothetical protein | |||
| 7855 | phage baseplate assembly protein V | |||
| 7860 | M | M.Bps21885ORF17955P (100% identity) | M.BpsP21885ORF7860P | |
| 7865 | 131 aa hypothetical protein | |||
| chromosome 2 | ||||
| 18185 | 72 aa hypothetical protein | |||
| 18190 | M | M.Bps21885ORF28225P (100% identity) | M.BpsP21885ORF18190P | |
| 18195 | replication endonuclease | |||
| 18310 | phage virion morphogenesis protein | |||
| 18315 | M | M.Bps21885ORF28350P (100% identity) | M.BpsP21885ORF18315P | |
| 18320 | phage baseplate assembly protein V | |||
| 21710 | tryptophan synthase subunit alpha | |||
| 21715 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.BpsP21885ORF21715P |
| 21720 | tryptophan synthase subunit beta | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 520 | 246 aa hypothetical protein | |||
| 525 | M | M.Bps21885ORF6925P (100% identity) | M.BpsP21885ORF525P | |
| 530 | R | Bps21885ORF6925P (100% identity) | BpsP21885ORF525P | |
| 535 | ATP-binding protein | |||
| 7275 | porin | |||
| 7280 | M | M.BpsW107ORF1669P (99% identity) | CACAG | M.BpsP21885ORF7280P |
| 7285 | R | Bps2514ORF20675P (100% identity) | CACAG | BpsP21885ORF7280P |
| 7290 | porin | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 8875 | M48 family metallopeptidase | |||
| 8880 | R | BpssB03McrBP (100% identity) | BpsP21885McrBP | |
| 8885 | R | Bps594McrCP (100% identity) | BpsP21885McrCP | |
| 8890 | IS3 family transposase | |||