Burkholderia pseudomallei VBM21885 |
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Putative Burkholderia pseudomallei VBM21885 RM systems
Ref: Balaji,V. et al. unpublished
REBASE ref # 31793
| Sequence length: | GenBank #: | |
| chromosome 1: | 4,117,487 bp | CP071749 |
| chromosome 2: | 3,203,152 bp | CP071750 |
REBASE acronym: Bps21885
Org_num: 46482
All begin J3B47_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 16940 | M48 family metallopeptidase | |||
| 16945 | R | BpsP21885ORF8860P (100% identity) | CGGANNNNNNNTGG | Bps21885ORF16955P |
| 16950 | S | S.BpsP21885ORF8860P (100% identity) | CGGANNNNNNNTGG | S.Bps21885ORF16955P |
| 16955 | M | M.BpsP21885ORF8860P (100% identity) | CGGANNNNNNNTGG | M.Bps21885ORF16955P |
| 16960 | monooxygenase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 915 | 77 aa hypothetical protein | |||
| 920 | V | V.BpsP21885ORF6535P (100% identity) | V.Bps21885ORF925P | |
| 925 | M | M.Bsp852ORF1300P (100% identity) | M.Bps21885ORF925P | |
| 930 | R | Bsp617ORF930P (100% identity) | Bps21885ORF925P | |
| 935 | 54 aa hypothetical protein | |||
| 965 | 816 aa hypothetical protein | |||
| 970 | M | M.BpsP21885ORF6490P (100% identity) | M.Bps21885ORF970P | |
| 975 | DUF3732 domain-containing protein | |||
| 2125 | ClpXP protease specificity-enhancing factor | |||
| 2135 | M | M.BpsP21885ORF5325P (100% identity) | M.Bps21885ORF2135P | |
| 2140 | tyrosine-type recombinase/integrase | |||
| 7260 | 81 aa hypothetical protein | |||
| 7265 | M | M.BpsP21885ORF185P (100% identity) | M.Bps21885ORF7265P | |
| 7270 | DNA topoisomerase III | |||
| 17950 | 131 aa hypothetical protein | |||
| 17955 | M | M.BpsP21885ORF7860P (100% identity) | M.Bps21885ORF17955P | |
| 17960 | phage baseplate assembly protein V | |||
| chromosome 2 | ||||
| 18700 | tryptophan synthase subunit alpha | |||
| 18705 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps21885ORF18705P |
| 18710 | tryptophan synthase subunit beta | |||
| 28220 | 72 aa hypothetical protein | |||
| 28225 | M | M.BpsP21885ORF18190P (100% identity) | M.Bps21885ORF28225P | |
| 28230 | replication endonuclease | |||
| 28345 | phage virion morphogenesis protein | |||
| 28350 | M | M.BpsP21885ORF18315P (100% identity) | M.Bps21885ORF28350P | |
| 28355 | phage baseplate assembly protein V | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 180 | porin | |||
| 185 | R | BpsP21885ORF7280P (100% identity) | CACAG | Bps21885ORF190P |
| 190 | M | M.BpsW107ORF1669P (99% identity) | CACAG | M.Bps21885ORF190P |
| 195 | porin | |||
| 6915 | ATP-binding protein | |||
| 6920 | R | BpsP21885ORF525P (100% identity) | Bps21885ORF6925P | |
| 6925 | M | M.BpsP21885ORF525P (100% identity) | M.Bps21885ORF6925P | |
| 6930 | 246 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 16925 | IS3 family transposase | |||
| 16930 | R | BpsP21885McrCP (100% identity) | Bps21885McrCP | |
| 16935 | R | BpssB03McrBP (100% identity) | Bps21885McrBP | |
| 16940 | M48 family metallopeptidase | |||