Escherichia coli ATCC 25922 |
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Putative Escherichia coli ATCC 25922 RM systems
Ref: Luo,Q. and Niu,T. unpublished
REBASE ref # 31811
| Sequence length: | GenBank #: | |
| Chromosome: | 5,152,857 bp | CP032085 |
| plasmid pL25922_3: | 94,204 bp | CP032086 |
REBASE acronym: Eco25922
Org_num: 13633
All begin D1792_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20470 | restriction endonuclease subunit S | |||
| ??? | M | M.EcoZLWTORF20795P (100% identity) | M.Eco25922ORF20475P | |
| 20480 | restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20065 | IS3 family transposase | |||
| 20070 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M1.Eco25922ORF2385P |
| 20075 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M2.Eco25922ORF2385P |
| 20080 | R | EcosS9ORF2810P (100% identity) | GGTCTC | Eco25922ORF2385P |
| 20085 | restriction endonuclease | |||
| plasmid pL25922_3 | ||||
| 26620 | 89 aa hypothetical protein | |||
| 26625 | M | M.EcoZLWTORF24570P (98% identity) | M.Eco25922ORF26625P | |
| 26635 | 92 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 20080 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| 20085 | R | EcosS9McrCP (100% identity) | Eco25922McrCP | |
| 20090 | R | EcosS9McrBP (93% identity) | Eco25922McrBP | |
| 20095 | IS3-like element ISEc52 family transposase | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1540 | recombination protein NinB | |||
| 1545 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.Eco25922ORF3685P |
| 1550 | NinE family protein | |||