Escherichia coli UPEC129 |
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Putative Escherichia coli UPEC129 RM systems
Ref: Auvray,F. et al. unpublished
REBASE ref # 31865
| Sequence length: | GenBank #: | |
| Chromosome: | 5,078,748 bp | CP071522 |
| plasmid p1_UPEC129: | 49,605 bp | CP071523 |
REBASE acronym: EcoC129
Org_num: 46807
All begin J3P56_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1805 | cell division protein DamX | |||
| 1810 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoC129DamP |
| 1815 | ribulose-phosphate 3-epimerase | |||
| 2405 | DUF2556 family protein | |||
| 2410 | M | M.PmeBin470ORFAP (100% identity) | ATGCAT | M.EcoC129ORF2410P |
| 2415 | DNA-binding transcriptional regulator Fis | |||
| 5735 | PerC family transcriptional regulator | |||
| 5740 | M | M.EcoY26ORF4515P (100% identity) | GATC | M.EcoC129ORF5740P |
| 5745 | LexA family transcriptional regulator | |||
| 8905 | PerC family transcriptional regulator | |||
| 8910 | M | M.Sso90ORF15820P (100% identity) | GATC | M.EcoC129ORF8910P |
| 8915 | LexA family transcriptional regulator | |||
| 10420 | TrmB family transcriptional regulator | |||
| 10425 | M | M.SboBSORF1444P (100% identity) | A | M.EcoC129ORF10425P |
| 10445 | DUF1737 domain-containing protein | |||
| 13670 | drug/metabolite exporter YedA | |||
| 13675 | V | V.EcosC25DcmP (100% identity) | V.EcoC129DcmP | |
| 13680 | M | M.SflC32DcmP (100% identity) | CCWGG | M.EcoC129DcmP |
| 13685 | phosphohydrolase | |||
| 20970 | McrC family protein | |||
| 20975 | R | EcosS9ORF2810P (100% identity) | GGTCTC | EcoC129ORF20980P |
| 20980 | M | M2.EcosS9ORF2810P (100% identity) | GGTCTC | M1.EcoC129ORF20980P |
| 20985 | M | M2.EcosEC4ORF20110P (100% identity) | GGTCTC | M2.EcoC129ORF20980P |
| 20990 | IS3 family transposase | |||
| 21230 | 174 aa hypothetical protein | |||
| 21235 | M | M.Sen5773ORF4471P (100% identity) | RCCGGY | M.EcoC129ORF21235P |
| 21240 | ATP-binding protein | |||
| 21245 | 126 aa hypothetical protein | |||
| 21250 | R | EcoSCU306ORF19130P (100% identity) | EcoC129ORF21250P | |
| 21255 | 97 aa hypothetical protein | |||
| plasmid p1_UPEC129 | ||||
| 24935 | 103 aa hypothetical protein | |||
| 24940 | M | M.Sfl0030ORFCP (100% identity) | SAY | M.EcoC129ORF24940P |
| 24945 | 73 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 5935 | recombinase family protein | |||
| 5940 | R | EspFAAGmrSDP (100% identity) | EcoC129GmrSDP | |
| 5945 | DinI-like family protein | |||
| 20960 | glycosyltransferase family 2 protein | |||
| 20965 | R | EcosS3McrBP (100% identity) | EcoC129McrBP | |
| 20970 | R | EcosS9McrCP (100% identity) | EcoC129McrCP | |
| 20975 | Alw26I/Eco31I/Esp3I family type II restriction | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 14860 | NinE family protein | |||
| 14865 | M | M.EcosC25ORF16305P (100% identity) | GATC | M.EcoC129ORF14865P |
| 14870 | recombination protein NinB | |||