Campylobacter jejuni GB28 |
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Putative Campylobacter jejuni GB28 RM systems
Ref: Heikema,A.P. et al. unpublished
REBASE ref # 31907
Complete sequence: 1,619,314 bp
GenBank #: CP071582
REBASE acronym: CjeGB28
Org_num: 47051
All begin J3Q12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3560 | molecular chaperone DnaK | |||
| 3565 | M | M.Csp93260ORF3690P (99% identity) | AGTNNNNNNRTTG | M.CjeGB28ORF3565P |
| 3570 | S | S.Cje65349ORF4325P (100% identity) | AGTNNNNNNRTTG | S.CjeGB28ORF3565P |
| 3575 | DUF4145 domain-containing protein | |||
| 3580 | DUF4917 family protein | |||
| 3585 | R | Csp93260ORF3690P (100% identity) | AGTNNNNNNRTTG | CjeGB28ORF3565P |
| 3590 | MBL fold metallo-hydrolase | |||
| 7330 | NAD(P)-dependent alcohol dehydrogenase | |||
| 7335 | R | CjeD445ORF7425P (100% identity) | CRTANNNNNNNNTAYC | CjeGB28ORF7355P |
| 7340 | DUF262 domain-containing protein | |||
| 7345 | S | S.CjeR72ORF7470P (100% identity) | CRTANNNNNNNNTAYC | S.CjeGB28ORF7355P |
| 7350 | Fic family protein | |||
| 7355 | M | M.Csp93241ORF7610P (100% identity) | CRTANNNNNNNNTAYC | M.CjeGB28ORF7355P |
| 7360 | carboxymuconolactone decarboxylase family | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 195 | gamma-glutamyltransferase | |||
| 200 | RM | Cje65349ORF8140P (100% identity) | CjeGB28ORF200P | |
| 205 | pentapeptide repeat-containing protein | |||
| 1005 | translation initiation factor IF-3 | |||
| 1010 | M | M.Csp93259ORF1035P (100% identity) | RAATTY | M.CjeGB28ORF1010P |
| 1015 | autotransporter serine protease VvfC | |||
| 8245 | Gfo/Idh/MocA family oxidoreductase | |||
| 8250 | M | M1.CjeR73ORF8285P (100% identity) | CATG | M1.CjeGB28ORF8250P |
| 8255 | DUF1016 family protein | |||
| 8260 | 73 aa hypothetical protein | |||
| 8265 | R | CjeR73ORF8285P (100% identity) | CjeGB28ORF8250P | |
| 8270 | 47 aa hypothetical protein | |||
| 8275 | M | M2.CjeR73ORF8285P (100% identity) | M2.CjeGB28ORF8250P | |
| 8280 | NADPH-dependent 7-cyano-7-deazaguanine reductase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 690 | ribosome maturation factor RimP | |||
| 695 | R | Cje65349McrBP (100% identity) | CjeGB28McrBP | |
| 700 | R | Csp9McrCP (100% identity) | CjeGB28McrCP | |
| 705 | metal ABC transporter permease | |||